Locally Estimated Scatterplot Smoothing for Censored Survival Data.

IF 2.1 4区 医学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY
David van Klaveren, Peter C Austin, Patrick W Serruys, Ben van Calster, Frank E Harrell
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Abstract

In the absence of censoring, locally estimated scatterplot smoothing (LOESS) is a powerful tool to estimate the relationship between a continuous covariate and the probability of an event and is often used to visually assess calibration of prognostic models. Since follow-up in prognostic studies is often incomplete, we aimed to study the extension of LOESS to right-censored data. In line with other work, we first obtained inverse-probability-of-censoring (IPC) weights through Kaplan-Meier estimation. When censoring varied by covariate levels, we used Cox regression with a spline function of the covariate to obtain IPC weights. We then applied LOESS to the weighted event indicators to estimate the relationship between the covariate and the probability of an event within a specific time horizon. We illustrated the application of LOESS for censored data (LOESScd) using patients with complex coronary artery disease. We used the LOESScd to estimate the association between continuous predictors and the probability of death within 10 years. LOESScd estimates closely followed grouped Kaplan-Meier estimates, especially in case of weak smoothing. Covariate-dependent IPC weights improved LOESScd when censoring varied by covariate levels. We then examined the finite-sample behavior of LOESScd in simulations motivated by four typical prognostic model validation scenarios. In 2000 samples of 1800 patients, bias was limited and coverage was close to nominal. In conclusion, LOESScd is a promising estimator of the relationship of a continuous covariate with the probability of an event in the presence of right-censoring. LOESScd is especially useful for estimating calibration curves when validating prognostic models.

截尾生存数据的局部估计散点图平滑。
在没有审查的情况下,局部估计散点图平滑(黄土)是估计连续协变量与事件概率之间关系的有力工具,通常用于视觉评估预测模型的校准。由于预后研究的随访往往是不完整的,我们的目的是研究黄土对右删减数据的扩展。在前人的基础上,我们首先通过Kaplan-Meier估计获得了IPC逆权值。当因协变量水平而变化时,我们使用带有协变量样条函数的Cox回归来获得IPC权重。然后,我们将黄土应用于加权事件指标,以估计协变量与特定时间范围内事件概率之间的关系。我们说明了黄土在剔除数据(LOESScd)中应用于复杂冠状动脉疾病患者。我们使用LOESScd来估计连续预测因子与10年内死亡概率之间的关联。LOESScd估计紧跟分组Kaplan-Meier估计,特别是在弱平滑的情况下。当因协变量水平而变化时,协变量相关的IPC权重改善了LOESScd。然后,我们在四种典型的预后模型验证情景的驱动下,研究了LOESScd的有限样本行为。在2000个1800名患者的样本中,偏倚是有限的,覆盖范围接近名义。总之,LOESScd是一个有希望的估计连续协变量的关系与事件的概率存在右审查。在验证预后模型时,LOESScd对于估计校准曲线特别有用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Statistics in Medicine
Statistics in Medicine 医学-公共卫生、环境卫生与职业卫生
CiteScore
3.40
自引率
10.00%
发文量
334
审稿时长
2-4 weeks
期刊介绍: The journal aims to influence practice in medicine and its associated sciences through the publication of papers on statistical and other quantitative methods. Papers will explain new methods and demonstrate their application, preferably through a substantive, real, motivating example or a comprehensive evaluation based on an illustrative example. Alternatively, papers will report on case-studies where creative use or technical generalizations of established methodology is directed towards a substantive application. Reviews of, and tutorials on, general topics relevant to the application of statistics to medicine will also be published. The main criteria for publication are appropriateness of the statistical methods to a particular medical problem and clarity of exposition. Papers with primarily mathematical content will be excluded. The journal aims to enhance communication between statisticians, clinicians and medical researchers.
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