Ab initio simulation of the absorption spectrum of Ruby and the role of vibronic coupling

IF 2.9 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Leon D. Starke, Amanda D. Torres, Alexandre B. Rocha
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引用次数: 0

Abstract

Context

Ruby is a material commonly found in Nature. Its red color is due to chromium impurity in the lattice of \(\alpha \)-alumina. It has several technological applications, such as lasers, thermometers, and radiation dosimeters. The study of its absorption spectrum is relevant in this context. On the other hand, vibronic coupling in solids is an important phenomenon since it can change the features of the absorption spectrum, especially when involving transition metal d-d electronic transitions in a quasi-octahedral environment, as in the case considered here. This work provides insight into the role of the vibronic coupling mechanism in the profile of the absorption spectrum of Ruby in the visible region.

Methods

The spectrum of Ruby, i.e., \(\alpha \)-alumina doped with chromium, is calculated within the linear response regime applied to a PBE DFT initial calculation. Intensities are taken as the imaginary part of the frequency-dependent dielectric function, obtained by the Green-Kubo formula. The model is composed of an \(\alpha \)-alumina supercell in which an aluminum atom is replaced by a chromium atom. Periodic boundary conditions were applied throughout. The vertical spectrum at the equilibrium geometry was first reported. Then, vibronic coupling effects were evaluated by carrying out distortions of the geometry along the normal modes related to the motions of chromium and its first neighbors. In addition, the effect of distortions involving combined modes was also assessed. In the last case, the modes are combined in pairs, generating hundreds of possibilities, all of which were carefully calculated. Modes (pure and combined) that change the absorption profile are clearly identified, and it is shown that they were able to change both position and intensity of the absorption peak in the visible region.

红宝石吸收光谱的从头算模拟及振动耦合的作用。
背景:Ruby是自然界中常见的一种材料。其呈红色是由于α -氧化铝晶格中的铬杂质所致。它有几种技术应用,如激光、温度计和辐射剂量计。对其吸收光谱的研究与此相关。另一方面,固体中的振动耦合是一个重要的现象,因为它可以改变吸收光谱的特征,特别是当涉及准八面体环境中的过渡金属d-d电子跃迁时,就像这里考虑的情况一样。这项工作提供了深入了解的作用,振动耦合机制在吸收光谱轮廓的红宝石在可见光区域。方法:采用PBE DFT初始计算的线性响应机制,计算了掺入铬的α -氧化铝的光谱。强度作为频率相关介电函数的虚部,由Green-Kubo公式得到。该模型由α -氧化铝超级单体组成,其中铝原子被铬原子取代。周期边界条件贯穿始终。首次报道了平衡几何结构下的垂直谱。然后,通过进行与铬及其第一邻体运动相关的几何形状沿正模的畸变来评估振动耦合效应。此外,还评估了涉及组合模式的畸变的影响。在最后一种情况下,模式成对组合,产生数百种可能性,所有这些都经过仔细计算。清晰地识别了改变吸收谱的模式(纯模式和组合模式),并表明它们能够改变可见光区吸收峰的位置和强度。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Molecular Modeling
Journal of Molecular Modeling 化学-化学综合
CiteScore
3.50
自引率
4.50%
发文量
362
审稿时长
2.9 months
期刊介绍: The Journal of Molecular Modeling focuses on "hardcore" modeling, publishing high-quality research and reports. Founded in 1995 as a purely electronic journal, it has adapted its format to include a full-color print edition, and adjusted its aims and scope fit the fast-changing field of molecular modeling, with a particular focus on three-dimensional modeling. Today, the journal covers all aspects of molecular modeling including life science modeling; materials modeling; new methods; and computational chemistry. Topics include computer-aided molecular design; rational drug design, de novo ligand design, receptor modeling and docking; cheminformatics, data analysis, visualization and mining; computational medicinal chemistry; homology modeling; simulation of peptides, DNA and other biopolymers; quantitative structure-activity relationships (QSAR) and ADME-modeling; modeling of biological reaction mechanisms; and combined experimental and computational studies in which calculations play a major role.
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