RedoxDB and RedEx: closing the DFT-experiment domain gap in redox potential prediction with transfer learning

IF 8.1 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Dat M Doan,Kim E. Jelfs,Qilei Song,Anthony Kucernak
{"title":"RedoxDB and RedEx: closing the DFT-experiment domain gap in redox potential prediction with transfer learning","authors":"Dat M Doan,Kim E. Jelfs,Qilei Song,Anthony Kucernak","doi":"10.1039/d6sc05970h","DOIUrl":null,"url":null,"abstract":"Organic redox-active molecules (ORMs) are promising components of aqueous electrolytes in redox flow batteries (RFBs), a scalable electrochemical energy storage technology designed to address the intermittency of renewable energy. However, the development of aqueous ORMs is challenged by the need to satisfy multiple property requirements, including redox potential (E◦), solubility and stability under operating conditions. Among these, redox potential is a critical parameter, as the thermodynamic stability window of water under standard conditions is limited to 0.000 -1.229 V, making accurate prediction essential to designing new ORMs. Conventional computational approaches for estimating E◦, such as density functional theory (DFT), can exhibit errors in the range of 0.2 -0.5 V relative to experiment. Here, we present RedoxDB, a new database of >7,500 DFT calculated redox potentials for aqueous ORMs, which we use to pre-train a prediction model. Our prediction model, RedEx, is an ensemble graph attention network (GAT) employing transfer learning for the accurate prediction of experimental redox potential values, to close the domain gap between DFT and experiment. The model is subsequently fine-tuned with a curated dataset of experimental redox potential values taken from the literature. We demonstrate that this transfer learning strategy improves predictive performance, achieving a mean absolute error of 0.057 V, significantly reducing the domain gap between DFT and experiment. The attention mechanism of the GAT model also provides interpretability, connecting predictions directly to chemically important structural motifs. We envisage this model will help facilitate the design of novel redox couples for aqueous organic RFBs. The associated code is available at github.","PeriodicalId":9909,"journal":{"name":"Chemical Science","volume":"3 1","pages":""},"PeriodicalIF":8.1000,"publicationDate":"2026-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Chemical Science","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1039/d6sc05970h","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

Abstract

Organic redox-active molecules (ORMs) are promising components of aqueous electrolytes in redox flow batteries (RFBs), a scalable electrochemical energy storage technology designed to address the intermittency of renewable energy. However, the development of aqueous ORMs is challenged by the need to satisfy multiple property requirements, including redox potential (E◦), solubility and stability under operating conditions. Among these, redox potential is a critical parameter, as the thermodynamic stability window of water under standard conditions is limited to 0.000 -1.229 V, making accurate prediction essential to designing new ORMs. Conventional computational approaches for estimating E◦, such as density functional theory (DFT), can exhibit errors in the range of 0.2 -0.5 V relative to experiment. Here, we present RedoxDB, a new database of >7,500 DFT calculated redox potentials for aqueous ORMs, which we use to pre-train a prediction model. Our prediction model, RedEx, is an ensemble graph attention network (GAT) employing transfer learning for the accurate prediction of experimental redox potential values, to close the domain gap between DFT and experiment. The model is subsequently fine-tuned with a curated dataset of experimental redox potential values taken from the literature. We demonstrate that this transfer learning strategy improves predictive performance, achieving a mean absolute error of 0.057 V, significantly reducing the domain gap between DFT and experiment. The attention mechanism of the GAT model also provides interpretability, connecting predictions directly to chemically important structural motifs. We envisage this model will help facilitate the design of novel redox couples for aqueous organic RFBs. The associated code is available at github.
RedoxDB和RedEx:用迁移学习缩小氧化还原电位预测中的dft实验域差距
有机氧化还原活性分子(orm)是氧化还原液电池(rfb)中有前途的水电解质成分,rfb是一种可扩展的电化学储能技术,旨在解决可再生能源的间歇性问题。然而,水性orm的开发面临着满足多种性能要求的挑战,包括氧化还原电位(E◦),在操作条件下的溶解度和稳定性。其中,氧化还原电位是一个关键参数,因为水在标准条件下的热力学稳定窗口被限制在0.000 -1.229 V,因此准确的预测对于设计新的orm至关重要。估计E◦的传统计算方法,如密度泛函理论(DFT),相对于实验,可以在0.2 -0.5 V的范围内显示误差。在这里,我们提出了RedoxDB,这是一个新的数据库,>7,500 DFT计算水性orm的氧化还原电位,我们使用它来预训练预测模型。我们的预测模型RedEx是一个集成图注意网络(GAT),它采用迁移学习来精确预测实验氧化还原电位值,以缩小DFT与实验之间的域差距。该模型随后通过从文献中获取的实验氧化还原电位值的策划数据集进行微调。我们证明了这种迁移学习策略提高了预测性能,实现了0.057 V的平均绝对误差,显著减小了DFT和实验之间的域间隙。GAT模型的注意机制也提供了可解释性,将预测直接与化学上重要的结构基序联系起来。我们设想这个模型将有助于促进新型氧化还原对的设计为水性有机rfb。相关代码可在github上获得。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Chemical Science
Chemical Science CHEMISTRY, MULTIDISCIPLINARY-
CiteScore
14.40
自引率
4.80%
发文量
1352
审稿时长
2.1 months
期刊介绍: Chemical Science is a journal that encompasses various disciplines within the chemical sciences. Its scope includes publishing ground-breaking research with significant implications for its respective field, as well as appealing to a wider audience in related areas. To be considered for publication, articles must showcase innovative and original advances in their field of study and be presented in a manner that is understandable to scientists from diverse backgrounds. However, the journal generally does not publish highly specialized research.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信
小红书