A New Reactive Force Field for NOx-Water Interactions: Development, Evaluation, and Molecular Dynamics Simulation of Peroxynitrite

IF 3.2 2区 化学 Q3 CHEMISTRY, PHYSICAL
The Journal of Physical Chemistry B Pub Date : 2026-10-08 Epub Date: 2026-09-25 DOI:10.1021/acs.jpcb.6c03657
Masoom Shaban, Adri C. T. van Duin, Diana van Duin, Margaret Kowalik, Mohammad E. Izadi, Alfred P. Weber, Nina Merkert
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引用次数: 0

Abstract

Reactive nitrogen species (RNSs) are key contributors to plasma-liquid processes and play a critical role in the chemistry of plasma-activated water (PAW). Despite their importance, their molecular-level behavior in aqueous environments is still not well understood, largely due to the absence of reliable reactive force fields. In this study, a new ReaxFF parameter set, ReaxFFCHONx-2026, is developed and systematically assessed for modeling nitrogen- and oxygen-containing reactive species under both gas-phase and aqueous conditions relevant to plasma systems. The parameter set is optimized using density functional theory (DFT) reference data for representative NOx reaction pathways and integrated with an existing aqueous/biomolecular ReaxFF framework to enable reactive molecular dynamics simulations in water. Its performance is validated through a range of structural, thermodynamic, and dynamic properties including radial distribution functions, potential energy profiles, and diffusion coefficients. The results demonstrate strong agreement with DFT calculations and previously reported data, particularly in describing N–O bond breaking and solvation behavior. As a case study, the interaction of peroxynitrite (ONOO–) with water is investigated using reactive molecular dynamics, where atomic charges are dynamically determined via the ReaxFF charge equilibration method. The simulations show protonation leading to ONOOH formation, pronounced site-specific solvation around oxygen atoms, and preferential cleavage of the peroxide O–O bond. Analysis of diffusion further indicates that the predicted transport properties of RNS are consistent with the available data, supporting the reliability of the developed force field. Overall, ReaxFFCHONx-2026 offers a robust framework for large-scale atomistic simulations of PAW and reactive nitrogen chemistry.

一氧化氮-水相互作用的新反应力场:过氧亚硝酸盐的发展、评价和分子动力学模拟
活性氮(RNSs)是等离子体液体过程的关键贡献者,在等离子体活化水(PAW)的化学反应中起着关键作用。尽管它们很重要,但它们在水环境中的分子水平行为仍然没有得到很好的理解,这主要是由于缺乏可靠的反作用力场。在本研究中,开发了新的ReaxFF参数集ReaxFFCHONx-2026,并对其进行了系统评估,用于模拟与等离子体系统相关的气相和水相条件下含氮和含氧反应物质。参数集使用密度泛函数理论(DFT)参考数据进行优化,用于代表性的NOx反应途径,并与现有的水/生物分子axff框架集成,以实现水中的反应性分子动力学模拟。它的性能通过一系列的结构、热力学和动态特性来验证,包括径向分布函数、势能分布和扩散系数。结果表明与DFT计算和先前报道的数据非常一致,特别是在描述N-O键断裂和溶剂化行为方面。作为一个案例研究,使用反应分子动力学研究了过氧亚硝酸盐(ONOO -)与水的相互作用,其中原子电荷通过ReaxFF电荷平衡方法动态确定。模拟表明质子化导致ONOOH的形成,氧原子周围明显的位点特异性溶剂化,以及过氧化物- o键的优先裂解。扩散分析进一步表明,预测的RNS输运性质与现有数据一致,支持了所建立力场的可靠性。总的来说,ReaxFFCHONx-2026为爪子和活性氮化学的大规模原子模拟提供了一个强大的框架。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
5.80
自引率
9.10%
发文量
965
审稿时长
1.6 months
期刊介绍: An essential criterion for acceptance of research articles in the journal is that they provide new physical insight. Please refer to the New Physical Insights virtual issue on what constitutes new physical insight. Manuscripts that are essentially reporting data or applications of data are, in general, not suitable for publication in JPC B.
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