Recent advances in AI-driven deep eutectic solvent design for biocatalysis: Co-design of extremozyme and reaction medium.

IF 7.2 Q2 Agricultural and Biological Sciences
生物设计研究(英文) Pub Date : 2026-09-10 eCollection Date: 2026-09-01 DOI:10.1016/j.bidere.2026.100109
Yuxuan Hou, Jinyu Meng, Binghui Chen, Jifeng Yuan, Shizhen Wang
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引用次数: 0

Abstract

Deep eutectic solvents (DES) have emerged as sustainable, highly tunable alternatives to conventional organic media for non-aqueous biocatalysis. DES dynamically interact with enzymes to shift reaction equilibria, enhance thermostability and tailor stereoselectivity. However, the vast combinatorial space and complex physicochemical properties of DES make traditional trial-and-error solvent engineering highly inefficient. This review systematically examines recent advancements in DES-driven biocatalysis and highlights the role of artificial intelligence (AI) for rational DES design. Specifically, it synthesizes evidence that DES composition and water content jointly shape enzyme-specific microenvironments and thereby affect catalytic performance. Extremozymes are also evaluated as candidate catalysts for DES-containing media and as sources of potentially transferable adaptation features for enzyme engineering. It then discusses how AI can support DES formation screening, prediction of physicochemical properties using quantitative structure-property relationship (QSPR) models, and candidate formulation generation at the solvent level. At the system level, the focus shifts to predicting how a specific enzyme responds to a defined formulation in terms of activity and stability. Finally, we outline a mechanistically informed, multi-objective framework that integrates DES composition, enzyme sequence and structure, and operating conditions with physicochemical calculations, AI-based prediction, and experimental validation, providing a practical route toward genuine DES-enzyme co-design.

人工智能驱动的生物催化深度共熔溶剂设计的最新进展:极端酶和反应介质的协同设计。
深度共晶溶剂(DES)已成为传统有机介质的可持续、高度可调的非水生物催化替代品。DES与酶动态相互作用,改变反应平衡,增强热稳定性和定向选择性。然而,DES巨大的组合空间和复杂的物理化学性质使得传统的试错溶剂工程效率极低。本文系统地回顾了DES驱动生物催化的最新进展,并强调了人工智能(AI)在合理DES设计中的作用。具体来说,它综合了DES组成和水含量共同塑造酶特异性微环境从而影响催化性能的证据。极端酶也被评估为含有des的培养基的候选催化剂,并作为酶工程中潜在可转移的适应性特征的来源。然后讨论了人工智能如何支持DES形成筛选,使用定量结构-性质关系(QSPR)模型预测物理化学性质,以及在溶剂水平上生成候选配方。在系统水平上,重点转移到预测特定酶在活性和稳定性方面如何响应已定义的配方。最后,我们概述了一个机械信息,多目标框架,将DES组成,酶序列和结构,操作条件与物理化学计算,基于人工智能的预测和实验验证相结合,为真正的DES酶协同设计提供了实用途径。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
3.90
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0.00%
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审稿时长
12 weeks
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