ML-RKIM: Physics-Informed Machine Learning for Reaction Kinetics Identification and Modeling

IF 6.4 2区 化学 Q1 CHEMISTRY, MEDICINAL
Paulina Portales Picazo, Navid Zobeiry
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引用次数: 0

Abstract

Kinetic processes play a central role in structural transformations across natural, engineered, and biological systems, ultimately determining their final properties. Traditional kinetic characterization methods are often time-consuming and resource-intensive, and require prior assumptions about the reaction mechanism. In this work, we present a physics-informed machine learning framework to extract closed-form kinetic representations from time-series data without preselecting a single reaction mechanism. The framework combines neural networks, physics-informed features, and sparse regularization. The framework was applied to a range of processes, including thermally driven reactions such as polymer curing and crystallization, and nonthermal processes such as enzymatic browning. The method identified sparse, closed-form kinetic representations while reducing reliance on a single predefined kinetic model. R2 values exceeded 98% for the synthetic cases and ranged from 76% to 92% for the experimental cases. In addition, a systematic ablation study evaluated robustness to noise, data availability, sampling density, incomplete measurements, and candidate function library variation, and an experimental case study was included to assess the performance under realistic conditions. These results demonstrate the potential of this approach to accelerate kinetic characterization across polymer, food, and biomolecular processing applications, where accurate kinetic models are essential.

ML-RKIM:基于物理的机器学习反应动力学识别和建模
动力学过程在自然、工程和生物系统的结构转化中起着核心作用,最终决定了它们的最终性质。传统的动力学表征方法往往耗时且资源密集,并且需要对反应机理进行预先假设。在这项工作中,我们提出了一个物理信息的机器学习框架,可以从时间序列数据中提取封闭形式的动力学表示,而无需预先选择单一的反应机制。该框架结合了神经网络、物理信息特征和稀疏正则化。该框架应用于一系列过程,包括热驱动反应,如聚合物固化和结晶,以及非热过程,如酶褐变。该方法识别稀疏、封闭形式的动力学表示,同时减少对单个预定义动力学模型的依赖。合成病例的R2值超过98%,实验病例的R2值在76% ~ 92%之间。此外,系统消融研究评估了噪声、数据可用性、采样密度、不完整测量和候选函数库变化的鲁棒性,并包括一个实验案例研究来评估现实条件下的性能。这些结果证明了这种方法在聚合物、食品和生物分子加工应用中加速动力学表征的潜力,在这些应用中,精确的动力学模型是必不可少的。
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来源期刊
CiteScore
9.80
自引率
10.70%
发文量
529
审稿时长
1.4 months
期刊介绍: The Journal of Chemical Information and Modeling publishes papers reporting new methodology and/or important applications in the fields of chemical informatics and molecular modeling. Specific topics include the representation and computer-based searching of chemical databases, molecular modeling, computer-aided molecular design of new materials, catalysts, or ligands, development of new computational methods or efficient algorithms for chemical software, and biopharmaceutical chemistry including analyses of biological activity and other issues related to drug discovery. Astute chemists, computer scientists, and information specialists look to this monthly’s insightful research studies, programming innovations, and software reviews to keep current with advances in this integral, multidisciplinary field. As a subscriber you’ll stay abreast of database search systems, use of graph theory in chemical problems, substructure search systems, pattern recognition and clustering, analysis of chemical and physical data, molecular modeling, graphics and natural language interfaces, bibliometric and citation analysis, and synthesis design and reactions databases.
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