{"title":"Polynomial smoothing and curvature estimation of noisy biological surfaces with application to aortic morphology.","authors":"Joseph A Pugar, Efi Efrati, Luka Pocivavsek","doi":"10.1103/b2th-3z6v","DOIUrl":null,"url":null,"abstract":"<p><p>We present a polynomial-based smoothing and curvature estimation pipeline for extracting geometric descriptors from noisy manifolds produced by segmentation of biological surfaces, with application to thoracic aortic geometry from computed tomography angiography (CTA). The approach is a mesh-adapted variant of local polynomial regression: we fit low-order polynomials on Monge patches to smooth segmentation noise while preserving volume, then estimate curvatures from the same locally defined polynomials. Conceptually, our smoothing step generalizes classic Savitzky-Golay least-squares fitting to irregularly sampled surface neighborhoods in the style of Locally Estimated Scatterplot Smoothing, while the curvature step follows standard differential geometry on Monge patches. Per-facet curvatures are aggregated into scale-invariant integrated quantities including the total squared and integrated Gaussian curvatures, which serve as global shape descriptors. The result is a transparent, reproducible workflow that preserves interpretable surface features and yields physically meaningful descriptors suitable for downstream modeling. We validate on a cohort of 267 CTA scans from normal and dissected aortas. As an illustrative downstream task, we show that integrated curvature descriptors derived from our pipeline recover outcome-group separability comparable to prior analyses, while providing a richer per-facet curvature field for future modeling.</p>","PeriodicalId":48698,"journal":{"name":"Physical Review E","volume":"114 2-1","pages":"024404"},"PeriodicalIF":2.5000,"publicationDate":"2026-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Physical Review E","FirstCategoryId":"101","ListUrlMain":"https://doi.org/10.1103/b2th-3z6v","RegionNum":3,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"PHYSICS, FLUIDS & PLASMAS","Score":null,"Total":0}
引用次数: 0
Abstract
We present a polynomial-based smoothing and curvature estimation pipeline for extracting geometric descriptors from noisy manifolds produced by segmentation of biological surfaces, with application to thoracic aortic geometry from computed tomography angiography (CTA). The approach is a mesh-adapted variant of local polynomial regression: we fit low-order polynomials on Monge patches to smooth segmentation noise while preserving volume, then estimate curvatures from the same locally defined polynomials. Conceptually, our smoothing step generalizes classic Savitzky-Golay least-squares fitting to irregularly sampled surface neighborhoods in the style of Locally Estimated Scatterplot Smoothing, while the curvature step follows standard differential geometry on Monge patches. Per-facet curvatures are aggregated into scale-invariant integrated quantities including the total squared and integrated Gaussian curvatures, which serve as global shape descriptors. The result is a transparent, reproducible workflow that preserves interpretable surface features and yields physically meaningful descriptors suitable for downstream modeling. We validate on a cohort of 267 CTA scans from normal and dissected aortas. As an illustrative downstream task, we show that integrated curvature descriptors derived from our pipeline recover outcome-group separability comparable to prior analyses, while providing a richer per-facet curvature field for future modeling.
期刊介绍:
Physical Review E (PRE), broad and interdisciplinary in scope, focuses on collective phenomena of many-body systems, with statistical physics and nonlinear dynamics as the central themes of the journal. Physical Review E publishes recent developments in biological and soft matter physics including granular materials, colloids, complex fluids, liquid crystals, and polymers. The journal covers fluid dynamics and plasma physics and includes sections on computational and interdisciplinary physics, for example, complex networks.