Context-informed personalized segmentation from radiology reports: A fully automated framework for long-term liver tumor follow-up

IF 3.2 2区 医学 Q1 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
Medical physics Pub Date : 2026-09-15 DOI:10.1002/mp.70624
Jaehee Chun, McKell Woodland, Austin Castelo, Caleb O'Connor, Mais Altaie, Aashish Gupta, Shanli Ding, Allyson Nguyen, Eugene J Koay, Kristy K Brock
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Abstract

Purpose

Personalized segmentation has been shown to improve performance over generalized models in follow-up imaging; however, its robustness across large temporal gaps remains unclear. We propose a fully automated, context-informed personalization framework that integrates radiology report-derived clinical context with imaging features to improve longitudinal liver tumor segmentation.

Methods

This retrospective study included 171 patients for generalized model training and 41 longitudinal patients with follow-up CT scans acquired 3–15 months after baseline for personalization and evaluation. We developed a U-Net-based vision-language segmentation framework that automatically summarizes free-text radiology reports, encodes them into language embeddings, and integrates them into intermediate image features to provide clinical context. A generalized model was trained using paired CT-report data. For each longitudinal patient, personalization was performed at the 3-month follow-up using either image-only input (vision-only personalization) or paired image–report input (context-informed personalization). Models were then evaluated on subsequent 6–15-month follow-up scans without further adaptation. Patients were stratified into Stable and Dynamic cohorts based on relative GTV volume variability. Performance was assessed using the Dice similarity coefficient (DSC) and LogPenalty Score (LPS), with additional ablation studies examining language models and report components.

Results

In the Dynamic cohort, vision-only personalization exhibited diminishing gains at later follow-up, whereas context-informed personalization maintained statistically significant improvements in ΔLPS at 9–15 months (p < 0.05). In the Stable cohort, both personalization strategies showed sustained performance with comparable segmentation accuracy, indicating that incorporating report-derived clinical context did not degrade performance in cases with limited anatomical variability. Ablation studies demonstrated that domain-specific encoder-based language models (BioClinicalBERT) outperformed larger generative models and that effective context integration did not require complex architectural modifications.

Conclusion

Incorporating report-derived clinical context improves the longitudinal robustness of personalized liver tumor segmentation, particularly in patients with dynamic tumor evolution. These findings suggest that clinically grounded language representations can stabilize personalization across extended follow-up while enabling fully automated and scalable deployment.

基于放射学报告的上下文信息个性化分割:肝脏肿瘤长期随访的全自动框架。
目的:个性化分割已被证明在随访成像中优于广义模型;然而,它在大时间间隔中的稳健性仍不清楚。我们提出了一个完全自动化的、环境知情的个性化框架,该框架将放射学报告衍生的临床环境与影像学特征相结合,以改善纵向肝脏肿瘤分割。方法:本回顾性研究纳入171例患者进行广义模型训练,41例纵向随访患者在基线后3-15个月进行CT扫描,以进行个性化和评估。我们开发了一个基于u - net的视觉语言分割框架,该框架可以自动总结自由文本放射学报告,将其编码为语言嵌入,并将其集成到中间图像特征中以提供临床上下文。使用配对ct报告数据训练广义模型。对于每个纵向患者,在3个月的随访中使用仅图像输入(仅视觉个性化)或配对图像报告输入(上下文知情个性化)进行个性化。然后在随后的6-15个月的随访扫描中评估模型,没有进一步的适应。根据相对GTV容量变异性将患者分为稳定组和动态组。使用Dice相似系数(DSC)和LogPenalty Score (LPS)对性能进行评估,并对语言模型和报告组件进行额外的消融研究。结果:在动态队列中,仅视觉个性化在后续随访中表现出减少的效果,而背景信息个性化在9-15个月时在ΔLPS中保持统计学上显著的改善(p结论:纳入报告衍生的临床背景可提高个性化肝脏肿瘤分割的纵向稳健性,特别是在动态肿瘤演变的患者中。这些发现表明,基于临床的语言表征可以在长期随访中稳定个性化,同时实现完全自动化和可扩展的部署。
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来源期刊
Medical physics
Medical physics 医学-核医学
CiteScore
6.80
自引率
15.80%
发文量
660
审稿时长
1.7 months
期刊介绍: Medical Physics publishes original, high impact physics, imaging science, and engineering research that advances patient diagnosis and therapy through contributions in 1) Basic science developments with high potential for clinical translation 2) Clinical applications of cutting edge engineering and physics innovations 3) Broadly applicable and innovative clinical physics developments Medical Physics is a journal of global scope and reach. By publishing in Medical Physics your research will reach an international, multidisciplinary audience including practicing medical physicists as well as physics- and engineering based translational scientists. We work closely with authors of promising articles to improve their quality.
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