[Exploring the feasibility and limitations of using large language model to interpret bibliometric findings: a case study in hemophilia gene therapy].

Q3 Medicine
Y Bai, H W Bo, F Xue, Y Wang, J Zhang, Z Song
{"title":"[Exploring the feasibility and limitations of using large language model to interpret bibliometric findings: a case study in hemophilia gene therapy].","authors":"Y Bai, H W Bo, F Xue, Y Wang, J Zhang, Z Song","doi":"10.3760/cma.j.cn121090-20260122-00046","DOIUrl":null,"url":null,"abstract":"<p><p><b>Objective:</b> To evaluate the feasibility and limitations of using a large language model to assist in the interpretation of bibliometric findings. <b>Methods:</b> This study retrieved 1599 English-language articles on hemophilia gene therapy published between 1970 and 2024 from the Web of Science Core Collection, comprising 1019 articles from the United States, 174 from China, and 172 from the United Kingdom. VOSviewer was used for keyword co-occurrence and clustering analyses of the global and country-specific datasets, whereas CiteSpace was used for keyword co-occurrence, clustering, and burst-detection analyses of the global dataset. Structured data exported from the two tools were interpreted with DeepSeek-R1-0528 to summarize research hotspots and their temporal evolution. Two domain experts independently interpreted the global data and reviewed the country-specific interpretations generated using DeepSeek. Additional literature searches on CRISPR/Cas9, stem-cell-based approaches, and in utero gene therapy were conducted to cross-validate the national research characteristics inferred by the model. <b>Results:</b> DeepSeek summarized global hemophilia gene therapy research into four major themes: the design and in vivo expression regulation of gene therapy vectors; Adeno-associated virus vector delivery strategies and breakthroughs in immunogenicity; the clinical translation and real-world application of gene therapy; the mechanisms of immune tolerance induction and inhibitor formation. Based on seven major CiteSpace clusters and the temporal and burst information of the keywords, DeepSeek further outlined four stages of development: early exploration of vectors and animal models, optimization of delivery and therapeutic strategies, clinical validation, and increasing attention to clinical application and patient benefits. The core research themes and overall developmental trajectory for the global dataset identified using DeepSeek were broadly consistent with expert interpretations, and the model rapidly generated well-structured summaries. However, expert calibration remained necessary for professional terminology, stage delineation, and historical milestone recognition. In country-specific datasets, DeepSeek demonstrated risks of conceptual conflation, overgeneralization of emerging research directions, and inappropriate cross-country comparisons according to within-country keyword frequencies or cluster strengths. Additional searches revealed that the relative prominence or absence of a keyword within a national dataset could not be directly interpreted as international leadership or a lack of research activity. <b>Conclusions:</b> Large language models can assist in interpreting global bibliometric findings and improve the efficiency of identifying research hotspots and outlining developmental trajectories; however, they cannot replace domain experts. Interpretations of emerging research directions and cross-country differences require expert review and calibration using globally comparable data obtained under a unified search strategy.</p>","PeriodicalId":24016,"journal":{"name":"Zhonghua xue ye xue za zhi = Zhonghua xueyexue zazhi","volume":"47 7","pages":"684-693"},"PeriodicalIF":0.0000,"publicationDate":"2026-07-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13575540/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Zhonghua xue ye xue za zhi = Zhonghua xueyexue zazhi","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3760/cma.j.cn121090-20260122-00046","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Medicine","Score":null,"Total":0}
引用次数: 0

Abstract

Objective: To evaluate the feasibility and limitations of using a large language model to assist in the interpretation of bibliometric findings. Methods: This study retrieved 1599 English-language articles on hemophilia gene therapy published between 1970 and 2024 from the Web of Science Core Collection, comprising 1019 articles from the United States, 174 from China, and 172 from the United Kingdom. VOSviewer was used for keyword co-occurrence and clustering analyses of the global and country-specific datasets, whereas CiteSpace was used for keyword co-occurrence, clustering, and burst-detection analyses of the global dataset. Structured data exported from the two tools were interpreted with DeepSeek-R1-0528 to summarize research hotspots and their temporal evolution. Two domain experts independently interpreted the global data and reviewed the country-specific interpretations generated using DeepSeek. Additional literature searches on CRISPR/Cas9, stem-cell-based approaches, and in utero gene therapy were conducted to cross-validate the national research characteristics inferred by the model. Results: DeepSeek summarized global hemophilia gene therapy research into four major themes: the design and in vivo expression regulation of gene therapy vectors; Adeno-associated virus vector delivery strategies and breakthroughs in immunogenicity; the clinical translation and real-world application of gene therapy; the mechanisms of immune tolerance induction and inhibitor formation. Based on seven major CiteSpace clusters and the temporal and burst information of the keywords, DeepSeek further outlined four stages of development: early exploration of vectors and animal models, optimization of delivery and therapeutic strategies, clinical validation, and increasing attention to clinical application and patient benefits. The core research themes and overall developmental trajectory for the global dataset identified using DeepSeek were broadly consistent with expert interpretations, and the model rapidly generated well-structured summaries. However, expert calibration remained necessary for professional terminology, stage delineation, and historical milestone recognition. In country-specific datasets, DeepSeek demonstrated risks of conceptual conflation, overgeneralization of emerging research directions, and inappropriate cross-country comparisons according to within-country keyword frequencies or cluster strengths. Additional searches revealed that the relative prominence or absence of a keyword within a national dataset could not be directly interpreted as international leadership or a lack of research activity. Conclusions: Large language models can assist in interpreting global bibliometric findings and improve the efficiency of identifying research hotspots and outlining developmental trajectories; however, they cannot replace domain experts. Interpretations of emerging research directions and cross-country differences require expert review and calibration using globally comparable data obtained under a unified search strategy.

[探索使用大型语言模型解释文献计量学发现的可行性和局限性:血友病基因治疗的案例研究]。
目的:评估使用大型语言模型辅助文献计量学研究结果解释的可行性和局限性。方法:本研究从Web of Science Core Collection检索1970 - 2024年间发表的1599篇血友病基因治疗的英文文章,其中美国1019篇,中国174篇,英国172篇。使用VOSviewer对全球和特定国家的数据集进行关键字共现和聚类分析,而使用CiteSpace对全球数据集进行关键字共现、聚类和突发检测分析。利用DeepSeek-R1-0528对两种工具导出的结构化数据进行解析,总结研究热点及其时间演变。两位领域专家独立解释了全球数据,并审查了使用DeepSeek生成的特定国家的解释。对CRISPR/Cas9、基于干细胞的方法和子宫内基因治疗进行了额外的文献检索,以交叉验证该模型推断的国家研究特征。结果:DeepSeek将全球血友病基因治疗研究归纳为四大主题:基因治疗载体的设计与体内表达调控;腺相关病毒载体传递策略及免疫原性研究进展基因治疗的临床转化与现实应用免疫耐受诱导和抑制剂形成的机制。基于七个主要的CiteSpace集群和关键词的时间和突发信息,DeepSeek进一步概述了四个发展阶段:载体和动物模型的早期探索,递送和治疗策略的优化,临床验证,以及对临床应用和患者利益的日益关注。使用DeepSeek确定的全球数据集的核心研究主题和总体发展轨迹与专家解释大致一致,并且该模型快速生成结构良好的摘要。然而,专家校准对于专业术语、阶段描述和历史里程碑识别仍然是必要的。在特定国家的数据集中,DeepSeek显示了概念合并、新兴研究方向过度概括以及根据国内关键字频率或聚类优势进行不适当的跨国比较的风险。额外的搜索显示,一个关键词在国家数据集中的相对突出或缺失不能直接解释为国际领先或缺乏研究活动。结论:大型语言模型有助于解释全球文献计量学发现,提高识别研究热点和概述发展轨迹的效率;然而,他们不能取代领域专家。对新兴研究方向和跨国差异的解释需要使用统一搜索策略下获得的全球可比数据进行专家审查和校准。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
0.80
自引率
0.00%
发文量
100
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信
小红书