PKiNN: a PET kinetics-informed neural network for dynamic PET kinetic modeling.

IF 3.1 3区 医学 Q2 ENGINEERING, BIOMEDICAL
Chunmeng Tang, Koen Van Laere, Michel Koole
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Abstract

Objective.Voxel-wise PET kinetic modeling of dynamic PET data enables the generation of quantitative parametric maps reflecting tracer kinetics, but it is computationally demanding and sensitive to noise. This study investigated whether embedding the underlying kinetic model of PET tracer behavior into a neural network framework (PET kinetics-informed neural network, PKiNN) improves voxel-wise parameter estimation compared with conventional linearized approaches.Approach.PKiNN, a recurrent neural network with long short-term memory (LSTM), was trained on simulated time-activity curves generated using a one-tissue compartment model (1TCM) with randomized kinetic parameters spanning physiologically plausible ranges. A kinetics-informed loss term was incorporated into the network loss function to constrain the predicted parameters. A baseline neural network (NN-LSTM) without the kinetics-informed loss was also trained for comparison. Performance was assessed across multiple simulated noise levels and using clinical11C-UCB-J PET data. A supplementary simplified reference tissue model (SRTM) implementation was evaluated as a proof of concept.Main results.Across all simulated noise levels, PKiNN consistently outperformed NN-LSTM, yielding lower relative error (RE, %) and absolute relative error (ARE, %) for,, and. For example, at an SNR of 20 dB, the REs and AREs forestimated by NN-LSTM wereand, respectively, while for thederived from PKiNN, RE and ARE wereand, respectively. For clinical11C-UCB-J PET data, PKiNN-derived voxel-wise maps showed close agreement with VOI-based 1TCM fitting, minimal bias inand, modest overestimation of, and reduced underestimation compared with Logan graphical analysis.Significance.Overall, PKiNN provides a fast, accurate, and noise-robust alternative to conventional 1TCM kinetic modeling, demonstrating feasibility for clinical PET, and the supplementary SRTM proof-of-concept provides preliminary evidence of its potential for extension to other kinetic models.

PKiNN:一个PET动力学信息神经网络,用于PET动力学建模。
目的:动态PET数据的体素PET动力学建模能够生成反映示踪剂动力学的定量参数图,但它对计算要求高且对噪声敏感。本研究探讨了将PET示踪剂行为的潜在动力学模型嵌入到神经网络框架(PET Kinetics-informed neural network, PKiNN)中,与传统的线性化方法相比,是否能改善体素参数估计。方法:PKiNN是一种具有长短期记忆(LSTM)的递归神经网络,使用单组织室模型(1TCM)生成的模拟时间-活动曲线进行训练,该模型具有跨越生理合理范围的随机动力学参数。在网络损失函数中加入动力学通知损失项来约束预测参数。没有动力学信息损失的基线神经网络(NN-LSTM)也被训练用于比较。补充简化参考组织模型(SRTM)的实现被评估为概念验证。 ;主要结果:在所有模拟噪声水平中,PKiNN始终优于NN-LSTM,对K1, k2和VT产生更低的绝对相对误差(ARE, %);例如,在信噪比为20 dB时,NN-LSTM估计的vtr的REs和AREs分别为-5.0±10.1%和8.7±7.2%,而PKiNN获得的vtr, RE和ARE分别为-0.5±4.6%和3.5±3.1%。对于临床11c - ucb - j PET数据,pkinn衍生的体素图显示与基于voi的1TCM拟合密切一致,k1和k2的偏差最小,与Logan图形分析相比,VT适度高估,低估减少。意义:总的来说,PKiNN为传统的1TCM动力学模型提供了一种快速、准确、抗噪声的替代方法,证明了临床PET的可行性,补充SRTM概念验证为其扩展到其他动力学模型的潜力提供了初步证据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Physics in medicine and biology
Physics in medicine and biology 医学-工程:生物医学
CiteScore
6.50
自引率
14.30%
发文量
409
审稿时长
2 months
期刊介绍: The development and application of theoretical, computational and experimental physics to medicine, physiology and biology. Topics covered are: therapy physics (including ionizing and non-ionizing radiation); biomedical imaging (e.g. x-ray, magnetic resonance, ultrasound, optical and nuclear imaging); image-guided interventions; image reconstruction and analysis (including kinetic modelling); artificial intelligence in biomedical physics and analysis; nanoparticles in imaging and therapy; radiobiology; radiation protection and patient dose monitoring; radiation dosimetry
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