Shilong Hu, Gen Li, Runduo Liu, Di Zhang, Wencheng Liu, Shouwei Tao, Zhuang Miao, Zhe Li, Bowen Ke
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引用次数: 0
Abstract
Voltage-gated sodium channel NaV1.8 plays a key role in the development and progression of neuropathic and inflammatory pain, making it an important target for chronic pain treatment. However, the development of drugs targeting NaV1.8 and other ion channels is still constrained by the low throughput and high cost of conventional patch-clamp techniques. Additionally, existing NaV1.8 inhibitors suffer from structural uniformity, poor analgesic activity and unfavorable pharmacokinetic properties. In this study, we built a customized virtual screening workflow that combines the structural features of the NaV1.8 binding pocket with large-scale molecular docking, and applied absolute binding free energy (ABFE) calculations to improve both accuracy and efficiency. Using cell membrane chromatography (CMC) combined with whole-cell patch-clamp assays, we identified compound 12 as a lead compound with potent inhibitory activity against NaV1.8. Based on compound 12, 17 derivatives were synthesized, and compound 12d was identified as the most promising one after a series of in vitro and in vivo evaluations. This study not only provides a promising lead compound for chronic pain therapy but also offers a paradigm for the precise design and development of drugs targeting other ion channels.
期刊介绍:
Bioorganic Chemistry publishes research that addresses biological questions at the molecular level, using organic chemistry and principles of physical organic chemistry. The scope of the journal covers a range of topics at the organic chemistry-biology interface, including: enzyme catalysis, biotransformation and enzyme inhibition; nucleic acids chemistry; medicinal chemistry; natural product chemistry, natural product synthesis and natural product biosynthesis; antimicrobial agents; lipid and peptide chemistry; biophysical chemistry; biological probes; bio-orthogonal chemistry and biomimetic chemistry.
For manuscripts dealing with synthetic bioactive compounds, the Journal requires that the molecular target of the compounds described must be known, and must be demonstrated experimentally in the manuscript. For studies involving natural products, if the molecular target is unknown, some data beyond simple cell-based toxicity studies to provide insight into the mechanism of action is required. Studies supported by molecular docking are welcome, but must be supported by experimental data. The Journal does not consider manuscripts that are purely theoretical or computational in nature.
The Journal publishes regular articles, short communications and reviews. Reviews are normally invited by Editors or Editorial Board members. Authors of unsolicited reviews should first contact an Editor or Editorial Board member to determine whether the proposed article is within the scope of the Journal.