Discovery and characterization of pyridazino[4,5-b]indol-4-one derivatives as NaV1.8 inhibitors: A novel approach for targeting chronic pain.

IF 5.1 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Bioorganic Chemistry Pub Date : 2026-10-05 Epub Date: 2026-08-13 DOI:10.1016/j.bioorg.2026.110375
Shilong Hu, Gen Li, Runduo Liu, Di Zhang, Wencheng Liu, Shouwei Tao, Zhuang Miao, Zhe Li, Bowen Ke
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引用次数: 0

Abstract

Voltage-gated sodium channel NaV1.8 plays a key role in the development and progression of neuropathic and inflammatory pain, making it an important target for chronic pain treatment. However, the development of drugs targeting NaV1.8 and other ion channels is still constrained by the low throughput and high cost of conventional patch-clamp techniques. Additionally, existing NaV1.8 inhibitors suffer from structural uniformity, poor analgesic activity and unfavorable pharmacokinetic properties. In this study, we built a customized virtual screening workflow that combines the structural features of the NaV1.8 binding pocket with large-scale molecular docking, and applied absolute binding free energy (ABFE) calculations to improve both accuracy and efficiency. Using cell membrane chromatography (CMC) combined with whole-cell patch-clamp assays, we identified compound 12 as a lead compound with potent inhibitory activity against NaV1.8. Based on compound 12, 17 derivatives were synthesized, and compound 12d was identified as the most promising one after a series of in vitro and in vivo evaluations. This study not only provides a promising lead compound for chronic pain therapy but also offers a paradigm for the precise design and development of drugs targeting other ion channels.

吡啶肼[4,5-b]吲哚-4-酮衍生物作为NaV1.8抑制剂的发现和表征:一种针对慢性疼痛的新方法。
电压门控钠通道NaV1.8在神经性和炎症性疼痛的发生发展中起着关键作用,是慢性疼痛治疗的重要靶点。然而,传统膜片钳技术的低通量和高成本仍然制约着靶向NaV1.8和其他离子通道药物的发展。此外,现有的NaV1.8抑制剂结构单一,镇痛活性差,药代动力学性质不利。在本研究中,我们将NaV1.8结合口袋的结构特点与大规模分子对接相结合,构建了定制化的虚拟筛选工作流程,并应用绝对结合自由能(ABFE)计算来提高准确性和效率。利用细胞膜色谱法(CMC)结合全细胞膜片钳法(膜片钳法),我们鉴定出化合物12为对NaV1.8具有较强抑制活性的先导化合物。在化合物12的基础上合成了17个衍生物,经过一系列体外和体内评价,化合物12d被认为是最有前途的衍生物。该研究不仅为慢性疼痛治疗提供了一种有前景的先导化合物,而且为靶向其他离子通道的药物的精确设计和开发提供了范例。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Bioorganic Chemistry
Bioorganic Chemistry 生物-生化与分子生物学
CiteScore
9.70
自引率
3.90%
发文量
679
审稿时长
31 days
期刊介绍: Bioorganic Chemistry publishes research that addresses biological questions at the molecular level, using organic chemistry and principles of physical organic chemistry. The scope of the journal covers a range of topics at the organic chemistry-biology interface, including: enzyme catalysis, biotransformation and enzyme inhibition; nucleic acids chemistry; medicinal chemistry; natural product chemistry, natural product synthesis and natural product biosynthesis; antimicrobial agents; lipid and peptide chemistry; biophysical chemistry; biological probes; bio-orthogonal chemistry and biomimetic chemistry. For manuscripts dealing with synthetic bioactive compounds, the Journal requires that the molecular target of the compounds described must be known, and must be demonstrated experimentally in the manuscript. For studies involving natural products, if the molecular target is unknown, some data beyond simple cell-based toxicity studies to provide insight into the mechanism of action is required. Studies supported by molecular docking are welcome, but must be supported by experimental data. The Journal does not consider manuscripts that are purely theoretical or computational in nature. The Journal publishes regular articles, short communications and reviews. Reviews are normally invited by Editors or Editorial Board members. Authors of unsolicited reviews should first contact an Editor or Editorial Board member to determine whether the proposed article is within the scope of the Journal.
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