Shannon sampling based approach for the structural solution of nano-objects by laboratory and synchrotron SAXS data.

IF 2.8 3区 材料科学 Q1 Biochemistry, Genetics and Molecular Biology
Journal of Applied Crystallography Pub Date : 2026-07-07 eCollection Date: 2026-08-01 DOI:10.1107/S1600576726004358
Liberato De Caro, Domenico Alberga, Francesco Scattarella, Teresa Sibillano, Vincenzo Mangini, Boyang Zhou, Thibaud Stoll, Cinzia Giannini
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引用次数: 0

Abstract

We propose a Shannon sampling based approach for the analysis of laboratory and synchrotron small-angle X-ray scattering (SAXS) data. This method avoids calculation of the pair distance distribution function P(r), which is typically used as an alternative to the model-dependent fitting of SAXS data for determining the size and shape of the scattering object. Using this new approach it is also possible to skip any model-dependent fit of the SAXS data. The method has been tested on SAXS data collected from Polysorbate 20, d-α-tocopheryl polyethyl-ene glycol 1000 succinate spheroidal core-shell micelles and relevant well known proteins (lysozyme, apoferritin, carbonic anhydrase 2) of different molecular weights. The results confirm the potential of the approach, even for laboratory scattering data and in the presence of polydispersity. The method allows the reliable derivation of maximum size, mass, volume, polar/equatorial asymmetry, hydration fraction, shell thickness and core/shell electron-density differences for core-shell structures, directly in the q domain, working on SAXS data measured from dilute samples for which interparticle structure factors are negligible.

基于实验室和同步加速器SAXS数据的纳米物体结构解的Shannon采样方法。
我们提出了一种基于香农采样的方法来分析实验室和同步加速器小角度x射线散射(SAXS)数据。该方法避免了对距离分布函数P(r)的计算,而P(r)通常被用作SAXS数据的模型相关拟合的替代方法,以确定散射物体的大小和形状。使用这种新方法,还可以跳过SAXS数据的任何模型相关拟合。用不同分子量的聚山梨酯20、d-α-生育酚聚乙二醇1000琥珀酸球状核-壳胶束和相关已知蛋白(溶菌酶、载铁蛋白、碳酸酐酶2)的SAXS数据对该方法进行了测试。结果证实了该方法的潜力,即使是在实验室散射数据和存在多分散的情况下。该方法可以直接在q域中可靠地推导出核-壳结构的最大尺寸、质量、体积、极性/赤道不对称、水化分数、壳层厚度和核/壳层电子密度差异,处理从颗粒间结构因素可以忽略不计的稀释样品中测量的SAXS数据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
10.00
自引率
3.30%
发文量
178
审稿时长
4.7 months
期刊介绍: Many research topics in condensed matter research, materials science and the life sciences make use of crystallographic methods to study crystalline and non-crystalline matter with neutrons, X-rays and electrons. Articles published in the Journal of Applied Crystallography focus on these methods and their use in identifying structural and diffusion-controlled phase transformations, structure-property relationships, structural changes of defects, interfaces and surfaces, etc. Developments of instrumentation and crystallographic apparatus, theory and interpretation, numerical analysis and other related subjects are also covered. The journal is the primary place where crystallographic computer program information is published.
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