Approximating Bayesian spatial relative risk of dengue in Bandung: A gradient boosting surrogate model with demographic and climatic features

IF 1.5 Q3 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH
Spatial and Spatio-Temporal Epidemiology Pub Date : 2026-08-01 Epub Date: 2026-07-24 DOI:10.1016/j.sste.2026.100832
Gwynne Joeloidian, Robyn Irawan, Benny Yong
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引用次数: 0

Abstract

Dengue Hemorrhagic Fever (DHF), a disease transmitted by Aedes aegypti mosquitoes, remains a critical public health issue. Bandung is recorded as having one of the highest numbers of DHF cases in Indonesia, exhibiting a concerning increasing trend annually. This persistent rise indicates that the current control efforts for DHF have not been optimal. In this study, the relative risk of DHF transmission across subdistricts in Bandung is estimated using the Besag, York, and Mollié (BYM) model within a Bayesian inference framework. The BYM model is extended by incorporating additional covariates: demographic factors, specifically the proportion of residents with blood type O, and climatic factors, including temperature, rainfall, wind speed, and humidity. These additions enhance model performance by specifying prior distributions for parameters corresponding to each covariate. Furthermore, to assess the potential of machine learning as a scalable forecasting tool, XGBoost and LightGBM are applied as non-parametric surrogates to the complex BYM model, utilizing covariates and binary adjacency matrices to capture spatial dependencies. Results suggest that climatic and demographic variables drive the spatial pattern of DHF, with the proportion of the population having blood type O emerging as the dominant variable improving both Bayesian and machine learning model performance. After hyperparameter tuning, both models approximated DHF relative risk at different levels of fidelity, yielding RMSE values of 0.30 for XGBoost and 0.16 for LightGBM. These findings demonstrate that LightGBM in particular can effectively emulate Bayesian spatial patterns, serving as a deployable tool for rapid risk forecasting while reducing reliance on computationally intensive MCMC simulations required for standard inference.

Abstract Image

万隆市登革热的贝叶斯空间相对危险度逼近:一个具有人口统计学和气候特征的梯度增强代理模型
登革热出血热(DHF)是一种由埃及伊蚊传播的疾病,仍然是一个严重的公共卫生问题。据记录,万隆是印度尼西亚登革出血热病例数量最多的城市之一,每年呈现令人担忧的增长趋势。这种持续上升表明,目前对登革出血热的控制工作尚未达到最佳效果。在本研究中,使用贝叶斯推断框架内的Besag、York和molli (BYM)模型估计万隆市各区之间登出血热传播的相对风险。BYM模型通过纳入额外的协变量进行扩展:人口因素,特别是O型血居民的比例,以及气候因素,包括温度、降雨量、风速和湿度。这些附加功能通过指定对应于每个协变量的参数的先验分布来增强模型性能。此外,为了评估机器学习作为可扩展预测工具的潜力,XGBoost和LightGBM作为复杂BYM模型的非参数替代品,利用协变量和二元邻接矩阵来捕获空间依赖性。结果表明,气候和人口变量驱动DHF的空间格局,O型血人口比例成为主导变量,提高了贝叶斯和机器学习模型的性能。经过超参数调整后,两个模型在不同保真度下近似DHF相对风险,XGBoost的RMSE值为0.30,LightGBM的RMSE值为0.16。这些发现表明,LightGBM可以有效地模拟贝叶斯空间模式,作为快速风险预测的可部署工具,同时减少对标准推理所需的计算密集型MCMC模拟的依赖。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Spatial and Spatio-Temporal Epidemiology
Spatial and Spatio-Temporal Epidemiology PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH-
CiteScore
5.10
自引率
8.80%
发文量
63
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