Detection of bronchopulmonary dysplasia in infants and prediction of school-age lung function from tidal breathing data using recurrent neural networks.
Abdessamad Falhi, Malena Gwerder, Céline Rüttimann, Urs Frey, Edgar Delgado-Eckert
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引用次数: 0
Abstract
Objective.To test whether machine learning (ML) models trained on tidal breathing flow time series can discriminate between individuals with and without respiratory disease and predict lung function indices obtained from conventional pulmonary function testing.Background.accurate assessment of respiratory function in infants and young children is challenging because conventional pulmonary function testing requires sophisticated equipment and/or active patient cooperation. Tidal breathing measurements, in contrast, can be obtained non-invasively with little or no patient cooperation and at low cost, yet their clinical utility has been limited. We hypothesized that sufficiently long tidal breathing flow time series contain clinically relevant information that can be extracted using a recurrent neural network known as a long short-term memory (LSTM) network.Approach.We evaluated LSTM models in two scenarios within the Basel-Bern Infant Lung Development cohort. First, we assessed the ability of a model trained on flow and derived volume time series to detect bronchopulmonary dysplasia (BPD) in 329 infants. Second, we examined whether a model trained on tidal breathing flow alone could predict forced expiratory volume in one second (FEV1) in 135 school-age children. Signals were filtered and normalized prior to model training, and performance was evaluated on held-out test datasets.Main results.For BPD detection, the model achieved 97.0% accuracy, 100% specificity, 91.7% sensitivity, 100% precision, and an F1-score of 95.7%. For FEV1prediction, Bland-Altman analysis showed a mean bias of -0.009 l (95% CI -0.091-0.074), with limits of agreement of -0.416 l and 0.399 l. The mean relative prediction error was 13.7%.Significance.These findings demonstrate that temporal patterns in tidal breathing flow signals contain diagnostically and functionally relevant information. ML applied to tidal breathing measurements may provide a low-burden, minimal-cooperation approach for early respiratory disease detection and functional assessment across early life stages.
目标。研究背景:准确评估婴幼儿呼吸功能是一项具有挑战性的工作,因为传统的肺功能检测需要复杂的设备和/或患者的积极配合。相比之下,潮汐呼吸测量可以在很少或没有患者合作的情况下以低成本获得无创呼吸,但其临床应用受到限制。我们假设足够长的潮汐呼吸流时间序列包含临床相关信息,可以使用称为长短期记忆(LSTM)网络的循环神经网络提取。方法。我们在巴塞尔-伯尔尼婴儿肺部发育队列的两种情况下评估LSTM模型。首先,我们评估了一个基于流量和导出的体积时间序列训练的模型检测329名婴儿支气管肺发育不良(BPD)的能力。其次,我们检查了仅训练潮汐呼吸流量的模型是否可以预测135名学龄儿童的一秒钟用力呼气量(FEV1)。在模型训练之前,对信号进行过滤和归一化,并在测试数据集上评估性能。主要的结果。对于BPD检测,该模型准确率为97.0%,特异性为100%,灵敏度为91.7%,精确度为100%,f1评分为95.7%。对于fev1预测,Bland-Altman分析显示平均偏差为-0.009 l (95% CI -0.091 ~ 0.074),一致性限为-0.416 l和0.399 l,平均相对预测误差为13.7%。这些发现表明潮汐呼吸流信号的时间模式包含诊断和功能相关信息。ML应用于潮汐呼吸测量可以为早期呼吸疾病检测和早期生命阶段的功能评估提供低负担、最小合作的方法。
期刊介绍:
Physiological Measurement publishes papers about the quantitative assessment and visualization of physiological function in clinical research and practice, with an emphasis on the development of new methods of measurement and their validation.
Papers are published on topics including:
applied physiology in illness and health
electrical bioimpedance, optical and acoustic measurement techniques
advanced methods of time series and other data analysis
biomedical and clinical engineering
in-patient and ambulatory monitoring
point-of-care technologies
novel clinical measurements of cardiovascular, neurological, and musculoskeletal systems.
measurements in molecular, cellular and organ physiology and electrophysiology
physiological modeling and simulation
novel biomedical sensors, instruments, devices and systems
measurement standards and guidelines.