OnTEPT: a multimodal OWL ontology for post-traumatic stress disorder.

IF 2.6 3区 工程技术 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY
José A Salazar-Castro, Fernando Bobillo, Diego M López, Diego H Peluffo-Ordóñez, Bernd Blobel
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引用次数: 0

Abstract

Background: Post-traumatic stress disorder (PTSD) is a heterogeneous neuropsychiatric condition that develops after exposure to traumatic events. Its diagnosis is currently governed by two major international classification systems, Diagnostic and Statistical Manual of Mental Disorders (DSM) and International Classification of Diseases) ICD, which differ in structure, granularity, and diagnostic thresholds. Moreover, PTSD assessment is also multimodal, spanning structured interviews, self-report psychometric instruments, and increasing neurophysiological recordings such as electroencephalography (EEG).

Objective: This study presents OnTEPT, an OWL-based multimodal ontology designed to formalize DSM-5 and ICD-11 diagnostic criteria, integrate psychometric instruments and EEG-derived features, and support automated reasoning over individual patient instances.

Results: OnTEPT was developed following Ontology Development 101 (OD101) in Protégé 5. A hybrid strategy was used, combining top-down and bottom-up approaches and reusing concepts from health and mental health ontologies. The current version includes 112 classes, 18 object properties, and 113 data properties. DSM-5 (A-H) and ICD-11 (1-6) criteria are formalized as OWL equivalence axioms. These use constraints on cardinality, duration, clinical significance, and exclusions. Dissociative and complex PTSD are also represented. Four instruments are modeled at the item-level with cutoff thresholds, and two of them are linked to diagnostic criteria through annotations. The ontology was populated with psychometric data from 304 patients, EEG data from 41 participants, and 30 structured synthetic instances generated with Owlready2. 36 quantitative EEG features are encoded as typed data properties. Validation with HermiT, Pellet, and FaCT + + confirmed logical consistency and class satisfiability. Four intentionally inconsistent instances were correctly rejected due to classification issues. Query-based validation retrieved 113 patients above screening thresholds. It also found three with full DSM-5 profiles, twelve under ICD-11, two with dissociative PTSD, and one with complex PTSD.

Conclusions: OnTEPT provides a computable semantic framework that harmonizes PTSD diagnosis and its subtypes between DSM-5 and ICD-11. It integrates psychometric and EEG information within a single ontology. Its main contribution is an inferential layer that enables the automated classification of patient instances using both diagnostic systems. The architecture is extensible and ready to include biomarker-based rules, longitudinal data, and semantic workflows to support clinical decision-making.

OnTEPT:创伤后应激障碍的多模态OWL本体。
背景:创伤后应激障碍(PTSD)是暴露于创伤性事件后发展的一种异质性神经精神疾病。其诊断目前由两个主要的国际分类系统,即《精神障碍诊断与统计手册》(DSM)和国际疾病分类(ICD),在结构、粒度和诊断阈值方面有所不同。此外,创伤后应激障碍的评估也是多模式的,包括结构化访谈、自我报告心理测量工具和越来越多的神经生理记录,如脑电图(EEG)。目的:本研究提出了OnTEPT,一个基于owl的多模态本体,旨在形式化DSM-5和ICD-11诊断标准,整合心理测量工具和脑电图衍生特征,并支持对个体患者实例的自动推理。结果:OnTEPT是在protp - 3中的Ontology Development 101 (OD101)基础上开发的。采用了一种混合策略,结合了自上而下和自下而上的方法,并重用了健康和心理健康本体论中的概念。当前版本包括112个类、18个对象属性和113个数据属性。DSM-5 (A-H)和ICD-11(1-6)标准被形式化为OWL等价公理。这些使用限制在基数、持续时间、临床意义和排除。分离性和复合性创伤后应激障碍也有表现。在项目级别对四个工具进行了建模,并设置了截止阈值,其中两个工具通过注释链接到诊断标准。本体由304名患者的心理测量数据、41名参与者的脑电图数据和30个由Owlready2生成的结构化合成实例填充。36个定量脑电图特征被编码为类型化数据属性。使用HermiT、Pellet和fact++进行验证,确认了逻辑一致性和类的可满足性。由于分类问题,四个故意不一致的实例被正确拒绝。基于查询的验证检索到113例高于筛选阈值的患者。研究还发现,3人患有完整的DSM-5, 12人患有ICD-11, 2人患有分离性PTSD, 1人患有复杂的PTSD。结论:OnTEPT提供了一个可计算的语义框架,用于协调DSM-5和ICD-11之间的PTSD诊断及其亚型。它将心理测量和脑电图信息集成在一个本体中。它的主要贡献是一个推理层,可以使用两种诊断系统对患者实例进行自动分类。该体系结构是可扩展的,可以包含基于生物标志物的规则、纵向数据和语义工作流,以支持临床决策。
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来源期刊
Journal of Biomedical Semantics
Journal of Biomedical Semantics MATHEMATICAL & COMPUTATIONAL BIOLOGY-
CiteScore
4.20
自引率
5.30%
发文量
28
审稿时长
30 weeks
期刊介绍: Journal of Biomedical Semantics addresses issues of semantic enrichment and semantic processing in the biomedical domain. The scope of the journal covers two main areas: Infrastructure for biomedical semantics: focusing on semantic resources and repositories, meta-data management and resource description, knowledge representation and semantic frameworks, the Biomedical Semantic Web, and semantic interoperability. Semantic mining, annotation, and analysis: focusing on approaches and applications of semantic resources; and tools for investigation, reasoning, prediction, and discoveries in biomedicine.
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