A comprehensive reference genome assembly dataset of birds inhabiting Denmark, Greenland, and the Faroe Islands.

IF 5 2区 生物学 Q1 MULTIDISCIPLINARY SCIENCES
Daniel Bilyeli Øksnebjerg, Sascha Dreyer Nielsen, Guangji Chen, Michael J Andersen, Vanessa Almagro, Roberto Ambrosini, Shigeki Asai, Sharon M Birks, Robb T Brumfield, Vojtěch Brlík, Annaïs Carbajal, Theresa M Burg, Sandra Bouwhuis, Shuang Wang, Wanjun Chen, Santiago Claramunt, Fuqiang Lin, Jiaqi Xu, Wei Dai, Scott V Edwards, Mary Margaret Ferraro, Joerns Fickel, Jon Fjeldså, Giulio Formenti, Jérôme Fuchs, Guido Roberto Gallo, Luca Gianfranceschi, Gary R Graves, Grzegorz Grzywaczewski, Wei Han, Tri Haryoko, Ando Haruko, Olof Hellgren, Juan Carlos Illera, Erich D Jarvis, Lars E Johannessen, Arild Johnsen, Ulf S Johansson, Knud Andreas Jønsson, Wei Jiang, Victoria Jayne, Takaharu Kawashima, Adam D Leaché, Fumin Lei, Jan T Lifjeld, Miriam Liedvogel, Yang Liu, Irby J Lovette, Sarah S T Mak, Isao Nishiumi, Michelle F O'Brien, Manabu Onuma, Bent Petersen, Martin Päckert, Marco Pavia, Alivia Price, Javier Quesada, Carsten Rahbek, Andrew Hart Reeve, Alejandro Rico-Guevara, Markus Risch, Vanya G Rohwer, Takema Saitoh, C Jonathan Schmitt, Anna Schnelle, Manuel Schweizer, Simona Secomandi, Paula Serres-Corral, Sara Shopland, Gang Song, Tamás Székely, Ivan J Starikov, Josefin Stiller, Xulan Shen, Zhongyi Sun, Dieter Thomas Tietze, Pavel S Tomkovich, Alfréd Trnka, Araxi O Urrutia, Sölvi Rúnar Vignisson, Kees Wanders, Michael Wink, Kevin Winker, Christopher C Witt, Jack J Withrow, Jessie L Williamson, Glenn Yannic, Nobuyuki Yamaguchi, Zhengwang Zhang, M Thomas P Gilbert, Guojie Zhang, Shaohong Feng, Peter A Hosner
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引用次数: 0

Abstract

Reference genome assemblies are essential infrastructure for investigating phylogeny and population/conservation genetics of wild organisms. Birds serve as model vertebrates in ecology and evolutionary biology due to their well-documented natural histories and extensive community science data. We release a set of 350 newly assembled avian genomes, which, when combined with 97 previously published genomes, represent 447 of the bird species recorded in Denmark, the Faroe Islands, and Greenland-the largest regional dataset of a vertebrate group to date. These genomes are published for various research activities. This data release advances the global effort to build comprehensive and accessible biodiversity genomic resources for the research community.

居住在丹麦、格陵兰岛和法罗群岛的鸟类的综合参考基因组组装数据集。
背景:参考基因组组装是研究野生生物系统发育和种群/保护遗传学的重要基础设施。鸟类在生态学和进化生物学中被认为是脊椎动物的典范,这是由于它们的自然历史和广泛的群落科学数据。研究结果:我们发布了一组350个新组装的鸟类基因组,这些基因组与先前发表的97个基因组相结合,代表了丹麦、法罗群岛和格陵兰岛记录的447种鸟类,这是迄今为止最大的脊椎动物群体区域数据集。这些基因组被发表用于各种研究活动。结论:该数据的发布促进了全球范围内为研究界建立全面、可获取的生物多样性基因组资源的努力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
GigaScience
GigaScience MULTIDISCIPLINARY SCIENCES-
CiteScore
15.50
自引率
1.10%
发文量
119
审稿时长
1 weeks
期刊介绍: GigaScience seeks to transform data dissemination and utilization in the life and biomedical sciences. As an online open-access open-data journal, it specializes in publishing "big-data" studies encompassing various fields. Its scope includes not only "omic" type data and the fields of high-throughput biology currently serviced by large public repositories, but also the growing range of more difficult-to-access data, such as imaging, neuroscience, ecology, cohort data, systems biology and other new types of large-scale shareable data.
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