Statistical inference after variable selection in Cox models: a neutral simulation study.

IF 3.7 3区 医学 Q1 HEALTH CARE SCIENCES & SERVICES
Lena Schemet, Sarah Friedrich-Welz
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引用次数: 0

Abstract

Choosing relevant predictors is central to the analysis of biomedical time-to-event data. Classical frequentist inference, however, presumes that the set of covariates is fixed in advance and does not account for data-driven variable selection. As a consequence, naive post-selection inference may be biased and misleading. In right-censored survival settings, these issues may be further exacerbated by the additional uncertainty induced by censoring. We investigate several inference procedures applied after variable selection for the coefficients of the Lasso and its extension, the adaptive Lasso, in the context of the Cox model. The methods considered include sample splitting, post-selection inference procedures that condition explicitly on the Lasso selection event, and the debiased Lasso. Because these methods address different inferential targets, we distinguish selected-submodel targets from full-model targets and interpret empirical coverage, interval width, power, and type I error accordingly. Their performance is examined in a neutral simulation study reflecting realistic covariate structures and censoring rates commonly encountered in biomedical applications. The primary focus is post-selection inference after Cox-Lasso variable selection, not a comprehensive benchmark of very-high-dimensional variable-selection performance. To complement the simulation results, we illustrate the practical behavior of these procedures in an applied example using a publicly available survival dataset.

Cox模型中变量选择后的统计推断:一项中性模拟研究。
选择相关的预测因子是分析生物医学事件时间数据的核心。然而,经典的频率论推理假定协变量集是预先固定的,并且不考虑数据驱动的变量选择。因此,朴素的后选择推理可能是有偏见和误导的。在权利审查的生存环境中,这些问题可能会因审查引起的额外不确定性而进一步恶化。我们研究了在Cox模型的背景下,Lasso及其扩展自适应Lasso的系数的变量选择后应用的几种推理程序。考虑的方法包括样本分裂,选择后推理程序,明确地以Lasso选择事件为条件,以及去偏Lasso。由于这些方法处理不同的推断目标,我们将选择的子模型目标与全模型目标区分开来,并相应地解释经验覆盖率、区间宽度、功率和I型误差。它们的性能在中性模拟研究中进行了检查,反映了现实的协变量结构和生物医学应用中常见的审查率。主要关注的是Cox-Lasso变量选择后的选择后推理,而不是非常高维变量选择性能的综合基准。为了补充模拟结果,我们使用公开可用的生存数据集在一个应用示例中说明了这些过程的实际行为。
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来源期刊
BMC Medical Research Methodology
BMC Medical Research Methodology 医学-卫生保健
CiteScore
6.50
自引率
2.50%
发文量
298
审稿时长
3-8 weeks
期刊介绍: BMC Medical Research Methodology is an open access journal publishing original peer-reviewed research articles in methodological approaches to healthcare research. Articles on the methodology of epidemiological research, clinical trials and meta-analysis/systematic review are particularly encouraged, as are empirical studies of the associations between choice of methodology and study outcomes. BMC Medical Research Methodology does not aim to publish articles describing scientific methods or techniques: these should be directed to the BMC journal covering the relevant biomedical subject area.
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