Multi-domain feature fusion with variational mode decomposition and hybrid LightGBM-Logistic Regression for multi-class seizure classification.

IF 7.9 3区 生物学 Q1 MATHEMATICAL & COMPUTATIONAL BIOLOGY
A Aameer Arshath, D Karthikeyan
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引用次数: 0

Abstract

Objective: The problem of seizure classification using multi-seizure types based on reduced-channel EEG recordings is difficult due to the complexity and nonlinearity of seizure patterns and their high class imbalance.

Methods: In this paper, a reduced-channel EEG-based method is proposed to perform automated multi-seizure classification using the Temple University Seizure Corpus (TUSZ) data set. The proposed approach uses the T3 and T4 EEG temporal channels and performs Variational Mode Decomposition (VMD) to decompose EEG signals into several intrinsic mode functions to extract the relevant temporal and spectral features of seizures. Next, multi-domain features, including statistical, spectral, entropy, and nonlinear features, are extracted from each VMD mode. To avoid the redundancy of the extracted features and preserve seizure-related features, an MI-RFE feature selection scheme is used. The extracted features were then classified using a stacked ensemble model incorporating LightGBM and logistic regression. For the purpose of ensuring unbiased testing and avoiding any information leakage, the Fold-Wise SMOTE technique was used in the process of stratified K-fold cross-validation.

Results: In experimental analysis of the developed technique with nine types of seizures, positive outcomes were obtained in terms of classification accuracy that included high classification accuracy, high weighted F1 measure, and multiclass ROC-AUC characteristics, resulting in classification accuracy of 92.16%. Also, when comparing the developed feature selection approach with standard techniques, the approach's efficiency was demonstrated.

Significance: The attained results show that the suggested approach for reducing the number of channels used in analyzing brain dynamics is effective.

Clinical trial number: Not applicable.

基于变分模分解和LightGBM-Logistic混合回归的多域特征融合多类癫痫发作分类。
目的:由于癫痫发作模式的复杂性、非线性和高度的类别不平衡性,在基于减少通道脑电图记录的多类型癫痫发作分类中存在困难。方法:本文提出了一种基于减少通道脑电图的方法,利用天普大学癫痫发作语料库(TUSZ)数据集进行自动多发作分类。该方法利用T3和T4脑电时间通道,通过变分模态分解(VMD)将脑电信号分解为多个本征模态函数,提取癫痫发作的相关时间和频谱特征。然后,从每个VMD模式中提取多域特征,包括统计特征、谱特征、熵特征和非线性特征。为了避免提取的特征冗余并保留与癫痫发作相关的特征,采用了一种MI-RFE特征选择方案。然后使用结合LightGBM和逻辑回归的堆叠集成模型对提取的特征进行分类。为了保证检验的无偏性和避免信息泄露,分层K-fold交叉验证过程中使用了Fold-Wise SMOTE技术。结果:在对9种癫痫发作类型进行的实验分析中,在分类精度方面取得了良好的结果,包括分类精度高、加权F1度量高、多类ROC-AUC特征,分类准确率为92.16%。通过与标准特征选择方法的比较,验证了该方法的有效性。意义:所获得的结果表明,所建议的方法减少了用于分析脑动力学的通道数量是有效的。临床试验号:不适用。
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来源期刊
Biodata Mining
Biodata Mining MATHEMATICAL & COMPUTATIONAL BIOLOGY-
CiteScore
7.90
自引率
0.00%
发文量
28
审稿时长
23 weeks
期刊介绍: BioData Mining is an open access, open peer-reviewed journal encompassing research on all aspects of data mining applied to high-dimensional biological and biomedical data, focusing on computational aspects of knowledge discovery from large-scale genetic, transcriptomic, genomic, proteomic, and metabolomic data. Topical areas include, but are not limited to: -Development, evaluation, and application of novel data mining and machine learning algorithms. -Adaptation, evaluation, and application of traditional data mining and machine learning algorithms. -Open-source software for the application of data mining and machine learning algorithms. -Design, development and integration of databases, software and web services for the storage, management, retrieval, and analysis of data from large scale studies. -Pre-processing, post-processing, modeling, and interpretation of data mining and machine learning results for biological interpretation and knowledge discovery.
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