A quantitative and precision‑oriented neuronal reconstruction approach based on data grading.

IF 8.3 Q1 Computer Science
Mingwei Liao, Chi Xiao, Xiaojun Wang, Qingming Luo, Hui Gong, Anan Li
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引用次数: 0

Abstract

Accurate and efficient neuronal reconstruction is essential for large-scale neuronal projection analysis and neural circuit mapping. However, conventional reconstruction approaches are often constrained by the structural complexity of neurons, the diversity of imaging signals, and variations in annotator expertise, making it difficult to simultaneously achieve high reconstruction quality and efficiency. To address these challenges, this study proposes a quantitative and precision-oriented neuronal reconstruction framework that systematically integrates reconstruction efficiency and accuracy modeling, data-algorithm matching, and refined task allocation strategies. First, mathematical models were established to quantitatively characterize reconstruction efficiency and accuracy, providing a theoretical foundation for precision reconstruction. Based on quantitative indicators of neuronal reconstruction difficulty, a data-algorithm precise matching strategy was developed to adaptively select the most suitable reconstruction method for different types of neuronal data while leveraging the complementary strengths of multiple reconstruction algorithms. Experimental results demonstrated significant improvements in reconstruction accuracy across multiple data categories, with the best-performing image category achieving an accuracy improvement of up to 18.8%. Furthermore, a data-annotator precise allocation strategy was proposed to match data difficulty with annotator capability, enabling efficient human-machine collaborative reconstruction and transforming conventional experience-based reconstruction into a precision-driven quantitative reconstruction paradigm. Compared with traditional reconstruction strategies, the proposed allocation strategy improved reconstruction accuracy by 44.3% and increased overall reconstruction efficiency by 34.6%. In summary, the proposed framework enables quantitative evaluation and controllable assurance of neuronal reconstruction quality. By transforming neuronal reconstruction from a conventional single-method paradigm into a data-driven precision decision-making paradigm, the proposed approach substantially improves reconstruction efficiency while maintaining high reconstruction quality. This work provides reliable methodological support and a solid data foundation for large-scale neuronal morphology analysis and neural circuit research.

一种基于数据分级的定量和精确神经元重建方法。
准确、高效的神经元重建是大规模神经元投影分析和神经回路映射的基础。然而,传统的重建方法往往受到神经元结构复杂性、成像信号多样性和注释者专业知识差异的限制,难以同时实现高质量和高效率的重建。为了解决这些挑战,本研究提出了一个定量和精确导向的神经元重建框架,该框架系统地集成了重建效率和准确性建模、数据算法匹配和精细任务分配策略。首先,建立数学模型,定量表征重建效率和精度,为精确重建提供理论基础。基于神经元重建难度的定量指标,提出了一种数据-算法精确匹配策略,利用多种重建算法的互补优势,自适应选择最适合不同类型神经元数据的重建方法。实验结果表明,在多个数据类别的重建精度显著提高,其中表现最好的图像类别的准确率提高高达18.8%。此外,提出了一种数据标注器精确分配策略,将数据难度与标注器能力匹配起来,实现高效的人机协同重构,将传统的基于经验的重构转变为精度驱动的定量重构范式。与传统重建策略相比,该分配策略的重建精度提高44.3%,整体重建效率提高34.6%。综上所述,该框架能够定量评估和控制神经元重建质量。该方法将传统的单一方法神经元重建模式转变为数据驱动的精确决策模式,在保持高重建质量的同时,大大提高了重建效率。这项工作为大规模的神经元形态分析和神经回路研究提供了可靠的方法支持和坚实的数据基础。
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来源期刊
Brain Informatics
Brain Informatics Computer Science-Computer Science Applications
CiteScore
9.50
自引率
0.00%
发文量
27
审稿时长
13 weeks
期刊介绍: Brain Informatics is an international, peer-reviewed, interdisciplinary open-access journal published under the brand SpringerOpen, which provides a unique platform for researchers and practitioners to disseminate original research on computational and informatics technologies related to brain. This journal addresses the computational, cognitive, physiological, biological, physical, ecological and social perspectives of brain informatics. It also welcomes emerging information technologies and advanced neuro-imaging technologies, such as big data analytics and interactive knowledge discovery related to various large-scale brain studies and their applications. This journal will publish high-quality original research papers, brief reports and critical reviews in all theoretical, technological, clinical and interdisciplinary studies that make up the field of brain informatics and its applications in brain-machine intelligence, brain-inspired intelligent systems, mental health and brain disorders, etc. The scope of papers includes the following five tracks: Track 1: Cognitive and Computational Foundations of Brain Science Track 2: Human Information Processing Systems Track 3: Brain Big Data Analytics, Curation and Management Track 4: Informatics Paradigms for Brain and Mental Health Research Track 5: Brain-Machine Intelligence and Brain-Inspired Computing
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