{"title":"Process optimization for amylase production by Bacillus subtilis R4 under agro-waste solid-state fermentation using statistical tools","authors":"Trisha Tiwari , Chandrashekhar Parab , Vimalkumar Prajapati , Swati Patel , Vaibhavkumar Mehta , Mrugesh D. Khunt","doi":"10.1016/j.egg.2026.100478","DOIUrl":null,"url":null,"abstract":"<div><div>Solid-state fermentation (SSF) is recognized as an efficient method for microbial enzyme production using low-cost agro-waste. In this study, 32 microbial isolates obtained from soil samples collected from ecological fields (rice, sweet potato, and elephant foot yam) were screened on starch agar plates for extracellular amylase production. Four promising isolates (R3, R4, SP8, and EFY11) were characterized based on morphological, biochemical, and amylolytic activity in liquid fermentation. Among them, isolate R4 exhibited the highest enzymatic activity and was selected for further investigation. Molecular identification using 16S rRNA sequencing confirmed R4 as <em>Bacillus subtilis</em>, and the sequence was deposited in GenBank (Accession No. PV934264). Amylase production by <em>B. subtilis</em> R4 was enhanced through SSF using wheat bran as the substrate. Initially, the one-factor-at-a-time (OFAT) approach was applied to evaluate the influence of various physicochemical parameters and media components on enzyme yield. Significant factors were subsequently identified using the Plackett–Burman (PB) design, which revealed fructose, pH, temperature, and moisture level as key variables. Further optimization using Central Composite Design under Response Surface Methodology (CCD-RSM) resulted in the development of a predictive model with an R<sup>2</sup> value of 0.8403. Validation under optimized conditions (fructose 0.075 g, pH 7.5, temperature 52 °C, and moisture level 10.5 mL) predicted an amylase activity of 36.98 U/gds, while experimental trials yielded 37.26 U/gds. The close agreement between predicted and observed values confirms the reliability of the model. These findings demonstrate the potential of <em>B. subtilis</em> R4 as a promising candidate for cost-effective amylase production from agricultural waste.</div></div>","PeriodicalId":37938,"journal":{"name":"Ecological Genetics and Genomics","volume":"39 ","pages":"Article 100478"},"PeriodicalIF":0.0000,"publicationDate":"2026-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Ecological Genetics and Genomics","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S240598542600039X","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2026/5/21 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 0
Abstract
Solid-state fermentation (SSF) is recognized as an efficient method for microbial enzyme production using low-cost agro-waste. In this study, 32 microbial isolates obtained from soil samples collected from ecological fields (rice, sweet potato, and elephant foot yam) were screened on starch agar plates for extracellular amylase production. Four promising isolates (R3, R4, SP8, and EFY11) were characterized based on morphological, biochemical, and amylolytic activity in liquid fermentation. Among them, isolate R4 exhibited the highest enzymatic activity and was selected for further investigation. Molecular identification using 16S rRNA sequencing confirmed R4 as Bacillus subtilis, and the sequence was deposited in GenBank (Accession No. PV934264). Amylase production by B. subtilis R4 was enhanced through SSF using wheat bran as the substrate. Initially, the one-factor-at-a-time (OFAT) approach was applied to evaluate the influence of various physicochemical parameters and media components on enzyme yield. Significant factors were subsequently identified using the Plackett–Burman (PB) design, which revealed fructose, pH, temperature, and moisture level as key variables. Further optimization using Central Composite Design under Response Surface Methodology (CCD-RSM) resulted in the development of a predictive model with an R2 value of 0.8403. Validation under optimized conditions (fructose 0.075 g, pH 7.5, temperature 52 °C, and moisture level 10.5 mL) predicted an amylase activity of 36.98 U/gds, while experimental trials yielded 37.26 U/gds. The close agreement between predicted and observed values confirms the reliability of the model. These findings demonstrate the potential of B. subtilis R4 as a promising candidate for cost-effective amylase production from agricultural waste.
期刊介绍:
Ecological Genetics and Genomics publishes ecological studies of broad interest that provide significant insight into ecological interactions or/ and species diversification. New data in these areas are published as research papers, or methods and resource reports that provide novel information on technologies or tools that will be of interest to a broad readership. Complete data sets are shared where appropriate. The journal also provides Reviews, and Perspectives articles, which present commentary on the latest advances published both here and elsewhere, placing such progress in its broader biological context. Topics include: -metagenomics -population genetics/genomics -evolutionary ecology -conservation and molecular adaptation -speciation genetics -environmental and marine genomics -ecological simulation -genomic divergence of organisms