QSAR-based evaluation of plant-derived larvicidal agents against Zika vector Aedes aegypti via Monte Carlo optimization and SMILES-based descriptors and molecular docking.

IF 2.8 3区 环境科学与生态学 Q3 CHEMISTRY, MULTIDISCIPLINARY
S Lotfi, F Nooraei, S Ahmadi
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引用次数: 0

Abstract

Aedes aegypti is the principal vector responsible for the transmission of several arboviral diseases, including dengue, Zika, chikungunya, and yellow fever, posing a significant threat to global public health. Controlling its population is crucial to limiting the spread of these infections. Among the most effective strategies is the use of larvicides derived from plant sources, which interfere with the mosquito's development and reduce its proliferation. This study presents a QSAR analysis of 255 plant-based larvicidal compounds against Aedes aegypti (Zika vector), using pLC50 values as the measure of bioactivity. QSAR models were developed using the CORAL software, which applies a Monte Carlo optimization algorithm to determine the correlation weights of molecular descriptors. The predictive power and reliability of the models were extensively validated using several statistical indicators. Results demonstrated that the models were robust, simple, and predictive, with validation metrics including r2, Q2, IIC, and CII ranging from 0.6877 to 0.7820, 0.6622 to 0.7643, 0.5638 to 0.8324, and 0.8248 to 0.8548, respectively. Based on these models, important molecular descriptors influencing the enhancement or reduction of larvicidal activity were determined. Furthermore, molecular docking studies were performed to investigate the binding interactions and conformational poses of the selected compounds.

基于蒙特卡罗优化、smiles描述符和分子对接的qsar评价植物源性灭蚊剂对Zika媒介埃及伊蚊的杀灭效果
埃及伊蚊是传播登革热、寨卡病毒、基孔肯雅热和黄热病等几种虫媒病毒性疾病的主要媒介,对全球公共卫生构成重大威胁。控制其人口对于限制这些感染的传播至关重要。最有效的策略之一是使用从植物中提取的杀幼虫剂,这可以干扰蚊子的发育并减少其增殖。本研究利用pLC50值作为生物活性指标,对255种植物基杀幼虫化合物对埃及伊蚊(Zika载体)进行了QSAR分析。使用CORAL软件开发QSAR模型,该软件应用蒙特卡罗优化算法确定分子描述符的相关权重。利用多个统计指标对模型的预测能力和可靠性进行了广泛的验证。验证指标r2、Q2、IIC和CII的取值范围分别为0.6877 ~ 0.7820、0.6622 ~ 0.7643、0.5638 ~ 0.8324和0.8248 ~ 0.8548,模型具有较好的鲁棒性、简单性和可预测性。基于这些模型,确定了影响杀虫活性增强或降低的重要分子描述符。此外,还进行了分子对接研究,以研究所选化合物的结合相互作用和构象姿态。
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来源期刊
CiteScore
5.20
自引率
20.00%
发文量
78
审稿时长
>24 weeks
期刊介绍: SAR and QSAR in Environmental Research is an international journal welcoming papers on the fundamental and practical aspects of the structure-activity and structure-property relationships in the fields of environmental science, agrochemistry, toxicology, pharmacology and applied chemistry. A unique aspect of the journal is the focus on emerging techniques for the building of SAR and QSAR models in these widely varying fields. The scope of the journal includes, but is not limited to, the topics of topological and physicochemical descriptors, mathematical, statistical and graphical methods for data analysis, computer methods and programs, original applications and comparative studies. In addition to primary scientific papers, the journal contains reviews of books and software and news of conferences. Special issues on topics of current and widespread interest to the SAR and QSAR community will be published from time to time.
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