Temperature Dependent Motions of N-Terminal Loop in PD-1 Determine the Affinity Towards Nivolumab.

IF 2.7 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Mohammad Karbalaeimahdi, Dircia C C Marcelina, Razvan C Stan
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引用次数: 0

Abstract

Programmed Cell Death-1 receptors on the surface of monocytes and T and B cells modulate various immune responses and are key immunotherapy targets. Immunotherapeutic monoclonal antibodies, including Nivolumab, block the activity of this receptor and are a mainstay of cancer therapy. Use of these drugs has been associated with side effects, including local inflammation and systemic fever in some cancer patients. To understand the role of physiologic (37°C), pathophysiologic (39°C) and standard (25°C) temperatures on the formation of the immune complexes between PD-1 and Nivolumab, we used Surface Plasmon Resonance and Molecular Dynamics simulations, at appropriate temperatures. The mean lives obtained from the dissociation curves of Nivolumab:PD-1 complexes at 37°C or 25°C are ~16 times and ~125 times longer, respectively, than those at 39°C (~7 s). These discrepancies are due to N-terminal loop from PD-1 moving away from Nivolumab only at the higher temperatures, as well as due to changes in the epitope:paratope interface.

PD-1中n端环的温度依赖运动决定了对尼武单抗的亲和力。
单核细胞、T细胞和B细胞表面的程序性细胞死亡-1受体调节各种免疫反应,是关键的免疫治疗靶点。免疫治疗单克隆抗体,包括Nivolumab,阻断该受体的活性,是癌症治疗的主要手段。这些药物的使用与副作用有关,包括一些癌症患者的局部炎症和全身发热。为了了解生理(37°C)、病理生理(39°C)和标准(25°C)温度对PD-1和Nivolumab之间免疫复合物形成的作用,我们在适当的温度下使用表面等离子体共振和分子动力学模拟。从Nivolumab:PD-1复合物在37°C或25°C的解离曲线中获得的平均寿命分别比39°C (~7 s)的解离曲线长~16倍和~125倍。这些差异是由于来自PD-1的n端环仅在较高温度下离开Nivolumab,以及由于表位:副表面界面的变化。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Molecular Recognition
Journal of Molecular Recognition 生物-生化与分子生物学
CiteScore
4.60
自引率
3.70%
发文量
68
审稿时长
2.7 months
期刊介绍: Journal of Molecular Recognition (JMR) publishes original research papers and reviews describing substantial advances in our understanding of molecular recognition phenomena in life sciences, covering all aspects from biochemistry, molecular biology, medicine, and biophysics. The research may employ experimental, theoretical and/or computational approaches. The focus of the journal is on recognition phenomena involving biomolecules and their biological / biochemical partners rather than on the recognition of metal ions or inorganic compounds. Molecular recognition involves non-covalent specific interactions between two or more biological molecules, molecular aggregates, cellular modules or organelles, as exemplified by receptor-ligand, antigen-antibody, nucleic acid-protein, sugar-lectin, to mention just a few of the possible interactions. The journal invites manuscripts that aim to achieve a complete description of molecular recognition mechanisms between well-characterized biomolecules in terms of structure, dynamics and biological activity. Such studies may help the future development of new drugs and vaccines, although the experimental testing of new drugs and vaccines falls outside the scope of the journal. Manuscripts that describe the application of standard approaches and techniques to design or model new molecular entities or to describe interactions between biomolecules, but do not provide new insights into molecular recognition processes will not be considered. Similarly, manuscripts involving biomolecules uncharacterized at the sequence level (e.g. calf thymus DNA) will not be considered.
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