A Noncanonical Model of DED1 Interaction Betweenc-FLIPS and Procaspase-8

IF 1.9 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Zhuo Zhu, Zhi-Qiang Bai
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引用次数: 0

Abstract

Procaspase-8 activation at the death-inducing signalling complex (DISC) is largely blocked by short c-FLIP isoforms (c-FLIPS). The interaction between c-FLIPS and procaspase-8 is mediated by their tandem death effector domains (tDED). The canonical model of tDED interaction suggests that c-FLIPS uses H1a/H4a α helices of DED1 to interact with the H2b/H5b α helices of procaspase-8 DED2. Here, based on the NMR chemical shift perturbation of c-FLIPS (F114G) resonances induced by titration with peptides derived from the helical regions of procaspase-8, a model structure of the c-FLIPS:procaspase-8 complex was constructed using HADDOK. The complex revealed that their interactions are mediated by the two binding clefts on DED1 of c-FLIPS and helices H1a/H4a of procaspase-8, the two clefts are formed by the α helices H1a, H5a, and H7a. The binding clefts on DED1 of c-FLIPS were also suggested to bind nuclear factor kappa B (NF-κB) essential modulator (NEMO) and initiate NF-κB pathway activation. To further investigate the interaction between c-FLIPS and NEMO, a c-FLIPS:NEMO complex model was also constructed. Two complex structural models revealed that c-FLIPS may interact with procaspase-8 and NEMO via a common binding surface. Furthermore, we hypothesized that c-FLIPS uses a similar binding surface to interact with both procaspase-8 and NEMO, thereby promoting cell survival by inhibiting caspase-8 activation and inducing NF-κB activity.

- flips与Procaspase-8相互作用的非规范模型。
死亡诱导信号复合体(DISC)上Procaspase-8的激活在很大程度上被短c-FLIP亚型(c-FLIPS)阻断。c-FLIPS和procaspase-8之间的相互作用是通过它们的串联死亡效应域(tDED)介导的。典型的tDED相互作用模型表明,c-FLIPS利用DED1的H1a/H4a α螺旋与procaspase-8 DED2的H2b/H5b α螺旋相互作用。本研究基于源自procaspase-8螺旋区的多肽滴定引起的c-FLIPS (F114G)共振的NMR化学位移扰动,利用HADDOK构建了c-FLIPS:procaspase-8复合物的模型结构。该复合物显示它们的相互作用是由c-FLIPS的DED1上的两个结合裂缝和procaspase-8的H1a/H4a螺旋介导的,这两个裂缝是由H1a、H5a和H7a的α螺旋形成的。c-FLIPS的DED1上的结合裂缝也被认为与核因子κB (NF-κB)必需调节剂(NEMO)结合,并启动NF-κB通路的激活。为了进一步研究c-FLIPS与NEMO之间的相互作用,我们还构建了c-FLIPS:NEMO复合模型。两个复杂的结构模型显示c-FLIPS可能通过一个共同的结合表面与procaspase-8和NEMO相互作用。此外,我们假设c-FLIPS使用类似的结合表面与caspase-8和NEMO相互作用,从而通过抑制caspase-8激活和诱导NF-κB活性来促进细胞存活。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
The Protein Journal
The Protein Journal 生物-生化与分子生物学
CiteScore
5.20
自引率
0.00%
发文量
57
审稿时长
12 months
期刊介绍: The Protein Journal (formerly the Journal of Protein Chemistry) publishes original research work on all aspects of proteins and peptides. These include studies concerned with covalent or three-dimensional structure determination (X-ray, NMR, cryoEM, EPR/ESR, optical methods, etc.), computational aspects of protein structure and function, protein folding and misfolding, assembly, genetics, evolution, proteomics, molecular biology, protein engineering, protein nanotechnology, protein purification and analysis and peptide synthesis, as well as the elucidation and interpretation of the molecular bases of biological activities of proteins and peptides. We accept original research papers, reviews, mini-reviews, hypotheses, opinion papers, and letters to the editor.
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