Robust chemotaxis beyond sensing limits: signal, noise, and strategy.

IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Robert G Endres
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引用次数: 0

Abstract

Bacterial chemotaxis has long been viewed as operating near the physical limits of sensing, as originally articulated by Berg and Purcell. Recent information-theoretic analyses challenge this view, suggesting thatEscherichia coliuses only a small fraction of the information available in ligand arrival statistics to bias its motion. How should such low information efficiency be interpreted at the level of behavior? Here, I argue that chemotactic performance is shaped not only by information transmission and noise, but by the strategy of movement itself. Using simple scaling arguments and minimal models, I show how run-and-tumble chemotaxis can remain robust to noise through symmetry and temporal averaging, even when internal information processing is inefficient. Comparing bacterial and eukaryotic chemotaxis highlights how different sensing strategies convert physical limits into observable behavior. These considerations suggest that low information efficiency need not imply poor performance, but may instead reflect an evolved balance between robustness, simplicity, and function.

超越传感限制的鲁棒趋化性:信号、噪声和策略。
正如Berg和Purcell最初阐述的那样,细菌趋化性长期以来一直被视为在传感的物理极限附近运作。最近的信息论分析挑战了这一观点,表明大肠杆菌仅使用配体到达统计中可用的一小部分信息来偏置其运动。如此低的信息效率在行为层面应该如何解释?在这里,我认为趋化性能不仅受信息传递和噪音的影响,而且受运动策略本身的影响。使用简单的缩放参数和最小模型,我展示了即使在内部信息处理效率低下的情况下,通过对称和时间平均,奔跑和翻滚的化学趋向性如何保持对噪声的鲁棒性。比较细菌和真核生物的趋化性突出了不同的传感策略如何将物理限制转化为可观察的行为。这些考虑表明,低信息效率不一定意味着低性能,而可能反映了健壮性、简单性和功能之间的逐渐平衡。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Physical biology
Physical biology 生物-生物物理
CiteScore
4.20
自引率
0.00%
发文量
50
审稿时长
3 months
期刊介绍: Physical Biology publishes articles in the broad interdisciplinary field bridging biology with the physical sciences and engineering. This journal focuses on research in which quantitative approaches – experimental, theoretical and modeling – lead to new insights into biological systems at all scales of space and time, and all levels of organizational complexity. Physical Biology accepts contributions from a wide range of biological sub-fields, including topics such as: molecular biophysics, including single molecule studies, protein-protein and protein-DNA interactions subcellular structures, organelle dynamics, membranes, protein assemblies, chromosome structure intracellular processes, e.g. cytoskeleton dynamics, cellular transport, cell division systems biology, e.g. signaling, gene regulation and metabolic networks cells and their microenvironment, e.g. cell mechanics and motility, chemotaxis, extracellular matrix, biofilms cell-material interactions, e.g. biointerfaces, electrical stimulation and sensing, endocytosis cell-cell interactions, cell aggregates, organoids, tissues and organs developmental dynamics, including pattern formation and morphogenesis physical and evolutionary aspects of disease, e.g. cancer progression, amyloid formation neuronal systems, including information processing by networks, memory and learning population dynamics, ecology, and evolution collective action and emergence of collective phenomena.
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