Crystal structure and Hirshfeld surface analysis of N-(1H-benzo[d]imidazol-2-yl)acetamide.

IF 0.6 Q4 CRYSTALLOGRAPHY
Akmaljon G Tojiboev, Rasul Okmanov, Asqar Abdurazakov, Sarvar Saidov, Elyor Rakhmatov, Abduakhad Kodirov, Burkhon Elmuradov
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引用次数: 0

Abstract

The crystal structure of the title com-pound, C9H9N3O, was refined using non-spherical scattering factors. This quantum crystallographic approach provided enhanced precision for the H-atom positions and a refined description of the electron density. The asymmetric unit com-prises two mol-ecules (Z' = 2) exhibiting high conformational similarity (r.m.s. deviation between the mol-ecules is 0.083 Å). In the crystal, mol-ecules form pseudocentrosymmetric dimers via inter-molecular N-H⋯O and N-H⋯N hy-dro-gen bonds. These units are further linked into supra-molecular layers characterized by D(1), C 2 2(8), C 2 2(10), R 2 2(8) and R 2 2(12) graph-set motifs. The packing is mainly consolidated by C-H⋯π inter-actions. Hirshfeld surface analysis and two-dimensional fingerprint plots were used to qu-antify the supra-molecular assembly, identifying H⋯H (45%), C⋯H/H⋯C (20.8%), N⋯H/H⋯N (12.2%) and O⋯H/H⋯O (11.5%) contacts as the primary contributors to the crystal packing.

N-(1h -苯并[d]咪唑-2-基)乙酰胺的晶体结构和Hirshfeld表面分析。
采用非球面散射因子对标题化合物c9h9n30o的晶体结构进行了细化。这种量子晶体学方法提高了h原子位置的精度和对电子密度的精细描述。不对称单元由两个分子(Z′= 2)组成,具有很高的构象相似性(分子间的均方根偏差为0.083 Å)。在晶体中,分子通过分子间N- h⋯O和N- h⋯N氢键形成伪熵对称二聚体。这些单元进一步连接成由D(1)、c22(8)、c22(10)、r22(8)和r22(12)图集基序表征的超分子层。填料主要由C-H⋯π相互作用固结。利用Hirshfeld表面分析和二维指纹图谱对超分子组装进行量化,鉴定出H⋯H(45%)、C⋯H/H⋯C(20.8%)、N⋯H/H⋯N(12.2%)和O⋯H/H⋯O(11.5%)接触是晶体堆积的主要贡献者。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
1.90
自引率
0.00%
发文量
351
审稿时长
3 weeks
期刊介绍: Acta Crystallographica Section E: Crystallographic Communications is the IUCr''s open-access structural communications journal. It provides a fast, simple and easily accessible publication mechanism for crystal structure determinations of inorganic, metal-organic and organic compounds. The electronic submission, validation, refereeing and publication facilities of the journal ensure rapid and high-quality publication of fully validated structures. The primary article category is Research Communications; these are peer-reviewed articles describing one or more structure determinations with appropriate discussion of the science.
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