A New Conditional Transcription Factor for Use in Toxoplasma Gondii.

IF 3.1 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS
Mohammad Farouq Sharifpour, Shadi Khadiv, Alessandro D Uboldi, Amalie A Jayawickrama, Sarah Manning, Jonathan Whittall, Cynthia D K Bottema, John T Ellis, Daniel K Howe, Danny W Wilson, Farhid Hemmatzadeh, Christopher J Tonkin, Milton M McAllister
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Abstract

Toxoplasma gondii is an intracellular eukaryotic parasite in the phylum Apicomplexa. Reversible, conditional control of gene transcription was achieved previously in this organism using a tet-off system that was controlled by tetracycline. Although revolutionary for the field at the time, that system in Toxoplasma yielded modest signal-to-noise ratios (SNR) and proved to be leaky in the "off" state (i.e., it suffered from high background expression). Here we report the development of a new reversible and robust Conditional Transcription Factor (CTF) that is controlled by rapamycin. Although we originally intended to design a dimerizable drug-on transcription control system, the CTF unexpectedly functions in a drug-off fashion. In stably-transfected tachyzoites, CTF regulates a fluorescent reporter gene in Toxoplasma to achieve almost no background expression in the presence of rapamycin (i.e. near-zero leakiness), while in the absence of rapamycin 84% of tachyzoites express EYFP in comparison with 87% of constitutively-expressed positive controls, with 59% mean fluorescence intensity relative to positive controls. Conditional regulation of the median fluorescence intensity of the reporter gene reached an impressive SNR averaging 1489, approximating an "on/off" switch. The modular design of the CTF is expected to facilitate application to varied genes, incremental modifications, and adaptation for use in other apicomplexan organisms.

一种新的用于刚地弓形虫的条件转录因子。
刚地弓形虫是顶复合体门的一种细胞内真核寄生虫。可逆的,有条件的基因转录控制以前是在这种生物体中实现的,使用四环素控制的检测系统。虽然该系统在当时的领域是革命性的,但在弓形虫中产生了适度的信噪比(SNR),并且在“关闭”状态下被证明是泄漏的(即,它遭受高背景表达)。在这里,我们报告了一种新的可逆和稳健的条件转录因子(CTF),由雷帕霉素控制的发展。虽然我们最初打算设计一个可二聚化的药物转录控制系统,但CTF出乎意料地以药物关闭方式起作用。在稳定转染的速殖子中,CTF调节弓形虫中的一个荧光报告基因,在雷帕霉素存在的情况下几乎没有背景表达(即接近零泄漏),而在雷帕霉素不存在的情况下,84%的速殖子表达EYFP,而组成表达的阳性对照中有87%表达EYFP,相对于阳性对照的平均荧光强度为59%。报告基因中位荧光强度的条件调控达到了令人印象深刻的平均信噪比1489,近似于“开/关”开关。CTF的模块化设计有望促进不同基因的应用,增加修饰,并适应其他顶复合体生物的使用。
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来源期刊
Biotechnology Journal
Biotechnology Journal Biochemistry, Genetics and Molecular Biology-Molecular Medicine
CiteScore
8.90
自引率
2.10%
发文量
123
审稿时长
1.5 months
期刊介绍: Biotechnology Journal (2019 Journal Citation Reports: 3.543) is fully comprehensive in its scope and publishes strictly peer-reviewed papers covering novel aspects and methods in all areas of biotechnology. Some issues are devoted to a special topic, providing the latest information on the most crucial areas of research and technological advances. In addition to these special issues, the journal welcomes unsolicited submissions for primary research articles, such as Research Articles, Rapid Communications and Biotech Methods. BTJ also welcomes proposals of Review Articles - please send in a brief outline of the article and the senior author''s CV to the editorial office. BTJ promotes a special emphasis on: Systems Biotechnology Synthetic Biology and Metabolic Engineering Nanobiotechnology and Biomaterials Tissue engineering, Regenerative Medicine and Stem cells Gene Editing, Gene therapy and Immunotherapy Omics technologies Industrial Biotechnology, Biopharmaceuticals and Biocatalysis Bioprocess engineering and Downstream processing Plant Biotechnology Biosafety, Biotech Ethics, Science Communication Methods and Advances.
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