{"title":"Mechanistic insights into the thermal decomposition of hexamethyldisilane: a reactive molecular dynamics study","authors":"Jieshun Zhang, Minglin Li, Ruoyu Hong, Chuanhao Dong","doi":"10.1007/s00894-026-06721-8","DOIUrl":null,"url":null,"abstract":"<div><h3>Context</h3><p>Hexamethyldisilane (HMDS) serves as a critical single-source precursor for the chemical vapor deposition (CVD) of silicon carbide (SiC), yet its atomic-level pyrolysis mechanism and the kinetics of radical generation remain unclear. This study investigates the thermal decomposition behavior of HMDS to provide theoretical guidance for optimizing SiC deposition processes. The results demonstrate that HMDS pyrolysis follows first-order kinetics with an apparent activation energy of 44.47 kcal/mol, a value significantly lower than the theoretical dissociation energy of the Si–Si bond. By combining this kinetic data with reaction pathway analysis, it is concluded that the decomposition is governed by a multistep cooperative mechanism rather than simple homolytic bond cleavage. The reaction proceeds through three distinct stages: initial precursor decomposition dominated by C–Si bond dissociation, secondary reactions of intermediates involving cascading demethylation, and small-molecule formation accompanied by radical recombination. Methyl radicals (CH<sub>3</sub>) are identified as the primary chain carriers, which are ultimately converted into thermodynamically stable methane (CH<sub>4</sub>) via hydrogen abstraction. Furthermore, temperature is found to critically regulate the generation and accumulation behavior of CH<sub>3</sub> radicals.</p><h3>Methods</h3><p>Density functional theory (DFT) calculations were carried out with Gaussian 16 at the unrestricted ωB97XD/6-311G(d,p) level to optimize geometries and train the force field. A broken-symmetry strategy with guess = (mix,always) and nosymm was adopted to reliably describe bond dissociation and radical behaviors. Using the high-quality DFT data, the ReaxFF force field was further optimized. Reactive molecular dynamics simulations were then performed in LAMMPS with the optimized potential under the NVT ensemble at 2500–4000 K with a 0.1-fs time step. A cubic box with 100 HMDS molecules and periodic boundary conditions was adopted, and each condition was run three times for statistical reliability.</p></div>","PeriodicalId":651,"journal":{"name":"Journal of Molecular Modeling","volume":"32 5","pages":""},"PeriodicalIF":2.5000,"publicationDate":"2026-04-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Molecular Modeling","FirstCategoryId":"92","ListUrlMain":"https://link.springer.com/article/10.1007/s00894-026-06721-8","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Context
Hexamethyldisilane (HMDS) serves as a critical single-source precursor for the chemical vapor deposition (CVD) of silicon carbide (SiC), yet its atomic-level pyrolysis mechanism and the kinetics of radical generation remain unclear. This study investigates the thermal decomposition behavior of HMDS to provide theoretical guidance for optimizing SiC deposition processes. The results demonstrate that HMDS pyrolysis follows first-order kinetics with an apparent activation energy of 44.47 kcal/mol, a value significantly lower than the theoretical dissociation energy of the Si–Si bond. By combining this kinetic data with reaction pathway analysis, it is concluded that the decomposition is governed by a multistep cooperative mechanism rather than simple homolytic bond cleavage. The reaction proceeds through three distinct stages: initial precursor decomposition dominated by C–Si bond dissociation, secondary reactions of intermediates involving cascading demethylation, and small-molecule formation accompanied by radical recombination. Methyl radicals (CH3) are identified as the primary chain carriers, which are ultimately converted into thermodynamically stable methane (CH4) via hydrogen abstraction. Furthermore, temperature is found to critically regulate the generation and accumulation behavior of CH3 radicals.
Methods
Density functional theory (DFT) calculations were carried out with Gaussian 16 at the unrestricted ωB97XD/6-311G(d,p) level to optimize geometries and train the force field. A broken-symmetry strategy with guess = (mix,always) and nosymm was adopted to reliably describe bond dissociation and radical behaviors. Using the high-quality DFT data, the ReaxFF force field was further optimized. Reactive molecular dynamics simulations were then performed in LAMMPS with the optimized potential under the NVT ensemble at 2500–4000 K with a 0.1-fs time step. A cubic box with 100 HMDS molecules and periodic boundary conditions was adopted, and each condition was run three times for statistical reliability.
期刊介绍:
The Journal of Molecular Modeling focuses on "hardcore" modeling, publishing high-quality research and reports. Founded in 1995 as a purely electronic journal, it has adapted its format to include a full-color print edition, and adjusted its aims and scope fit the fast-changing field of molecular modeling, with a particular focus on three-dimensional modeling.
Today, the journal covers all aspects of molecular modeling including life science modeling; materials modeling; new methods; and computational chemistry.
Topics include computer-aided molecular design; rational drug design, de novo ligand design, receptor modeling and docking; cheminformatics, data analysis, visualization and mining; computational medicinal chemistry; homology modeling; simulation of peptides, DNA and other biopolymers; quantitative structure-activity relationships (QSAR) and ADME-modeling; modeling of biological reaction mechanisms; and combined experimental and computational studies in which calculations play a major role.