Distinguishing cancer patients' mild and severe symptoms in radiotherapy via zero-shot and few-shot large language model-based probabilistic prompts.

IF 7.9 3区 生物学 Q1 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Matthew W Chen, Yang Yan, Xinglei Shen, Hao Gao, Zhong Chen
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引用次数: 0

Abstract

PURPOSE: Monitoring symptom severity during and after radiotherapy (RT) is critical for cancer patient care, however, existing machine learning and deep learning approaches face high retraining costs and lack clinically acceptable explanations. This study aims to investigate effective prompts for LLM-based reasoning and decision-making, distinguishing cancer patients’ mild and severe status during and after radiotherapy across multiple health symptoms. METHODS: To overcome these limitations, we developed a set of few-shot Large Language Model (LLM)-based predictive models operating under an anomaly detection framework (AD-LLM). Our approach leverages six novel, probabilistically designed prompts tailored for AD-LLM to identify and track patients with mild or severe symptoms, enabling accurate prediction despite limited patient-specific data. RESULTS: Experiments on prostate cancer patients monitoring bowel pain, depression, and sexual dysfunction problems demonstrated AD-LLM’s effectiveness in classifying symptom severity levels using these structured prompts. We evaluate the performance of different prompt strategies using AUC, AUCPR, Precision, Recall, and F1 scores, with confusion matrices and ROC/PR curves visualized to offer insights into LLM reasoning. The reasoning examples of LLMs are also provided to explain and understand their decision-making process. CONCLUSION: This method provides a promising and explainable solution for real-time symptom monitoring in RT settings, potentially improving timely intervention and patient outcomes.

基于零针和少针大语言模型的概率提示区分放疗中癌症患者轻、重度症状。
目的:在放疗期间和放疗后监测症状严重程度对癌症患者的护理至关重要,然而,现有的机器学习和深度学习方法面临着高昂的再培训成本,并且缺乏临床可接受的解释。本研究旨在探讨基于llm的推理和决策的有效提示,在多种健康症状中区分癌症患者放疗期间和放疗后的轻度和重度状态。方法:为了克服这些限制,我们在异常检测框架(AD-LLM)下开发了一套基于少量大语言模型(LLM)的预测模型。我们的方法利用为AD-LLM量身定制的六种新颖的概率设计提示来识别和跟踪轻度或重度症状的患者,尽管患者特异性数据有限,但仍能实现准确的预测。结果:对前列腺癌患者监测肠痛、抑郁和性功能障碍问题的实验表明,AD-LLM在使用这些结构化提示对症状严重程度进行分类方面是有效的。我们使用AUC、AUCPR、Precision、Recall和F1分数来评估不同提示策略的性能,并将混淆矩阵和ROC/PR曲线可视化,以提供对LLM推理的见解。本文还提供了法学硕士的推理实例,以解释和理解法学硕士的决策过程。结论:该方法为RT环境下的实时症状监测提供了一种有前景且可解释的解决方案,可能改善及时干预和患者预后。
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来源期刊
Biodata Mining
Biodata Mining MATHEMATICAL & COMPUTATIONAL BIOLOGY-
CiteScore
7.90
自引率
0.00%
发文量
28
审稿时长
23 weeks
期刊介绍: BioData Mining is an open access, open peer-reviewed journal encompassing research on all aspects of data mining applied to high-dimensional biological and biomedical data, focusing on computational aspects of knowledge discovery from large-scale genetic, transcriptomic, genomic, proteomic, and metabolomic data. Topical areas include, but are not limited to: -Development, evaluation, and application of novel data mining and machine learning algorithms. -Adaptation, evaluation, and application of traditional data mining and machine learning algorithms. -Open-source software for the application of data mining and machine learning algorithms. -Design, development and integration of databases, software and web services for the storage, management, retrieval, and analysis of data from large scale studies. -Pre-processing, post-processing, modeling, and interpretation of data mining and machine learning results for biological interpretation and knowledge discovery.
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