Cellular Responses of Maize Roots to Long-Term Cadmium Exposure: Adjustments of Class III Peroxidases, Plasma Membrane and Tonoplast Sub-Proteomes.

IF 3.6 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Sabine Lüthje, Ayse Gül Yilmaz, Kalaivani Ramanathan, Waldemar Gräfenstein, Jenny M Tabbert, Stefanie Wienkoop, Katrin Heino, François Clement Perrineau, Sönke Harder
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引用次数: 0

Abstract

Background: Crop plants have to deal with long-term cadmium exposure to farmlands contaminated by intensive use of fertilizers and pesticides. For uptake and sequestration, Cd2+ has to pass the plasma membrane and tonoplast. Class III peroxidases, plasma membrane, and tonoplast sub-proteomes were studied.

Methods: Control and Cd2+-treated maize (Zea mays L.) were grown in hydroponics for 18 days. Soluble peroxidases were partially purified by chromatofocusing and characterized by substrate specificity. Membrane-bound peroxidases were analyzed spectrophotometrically and by non-reducing SDS-PAGE. Soluble and plasma membrane-bound peroxidases were identified by mass spectrometry. Shotgun proteomics was used to identify membrane proteins of differential abundance.

Results: Guaiacol peroxidase activities increased in soluble fractions of Cd2+ samples. A Cd2+-specific soluble peroxidase (ZmPrx101) was identified, and ZmPrx85 abundance increased significantly in the plasma membrane. Substrate specificity of peroxidases revealed a preference for ferulic acid and esculetin, which was confirmed by docking analyses. Primary active transporters increased auxin efflux (brachytic2, ABCB9, and ABCB21), Cd2+ exclusion (ABCG34), and sequestration into the vacuole (HMA2, ABCB27). Evaluation of sub-proteome fractions demonstrated significant changes for proteins involved in disease resistance responses and cell wall modification.

Conclusions: Molecular adjustments of maize root proteome to long-term Cd2+ exposure revealed relevance of low-abundant proteins for Cd2+ tolerance and putative stress markers.

玉米根系对长期镉暴露的细胞反应:III类过氧化物酶、质膜和质质体亚蛋白质组的调节。
背景:由于化肥和农药的大量使用,农作物必须长期暴露在镉污染的农田中。为了吸收和隔离,Cd2+必须通过质膜和细胞质。研究了III类过氧化物酶、质膜和质体亚蛋白质组。方法:对照玉米和Cd2+处理玉米(Zea mays L.)水培18 d。可溶性过氧化物酶通过色谱聚焦部分纯化,并通过底物特异性进行表征。用分光光度法和非还原性SDS-PAGE分析膜结合过氧化物酶。质谱法鉴定了可溶性过氧化物酶和质膜结合过氧化物酶。采用散弹枪蛋白质组学方法鉴定不同丰度的膜蛋白。结果:愈创木酚过氧化物酶活性在Cd2+样品的可溶性部分增加。鉴定出Cd2+特异性可溶性过氧化物酶(ZmPrx101), ZmPrx85在质膜中的丰度显著增加。过氧化物酶的底物特异性显示对阿魏酸和槲皮素的偏好,对接分析证实了这一点。主要活性转运蛋白增加生长素外排(brachytic2、ABCB9和ABCB21)、Cd2+排斥(ABCG34)和液泡隔离(HMA2、ABCB27)。亚蛋白质组的评估表明,参与抗病反应和细胞壁修饰的蛋白质发生了显著变化。结论:玉米根系蛋白质组对长期Cd2+暴露的分子调节揭示了低丰度蛋白与Cd2+耐受性和假定的胁迫标志物的相关性。
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来源期刊
Proteomes
Proteomes Biochemistry, Genetics and Molecular Biology-Clinical Biochemistry
CiteScore
6.50
自引率
3.00%
发文量
37
审稿时长
11 weeks
期刊介绍: Proteomes (ISSN 2227-7382) is an open access, peer reviewed journal on all aspects of proteome science. Proteomes covers the multi-disciplinary topics of structural and functional biology, protein chemistry, cell biology, methodology used for protein analysis, including mass spectrometry, protein arrays, bioinformatics, HTS assays, etc. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. Therefore, there is no restriction on the length of papers. Scope: -whole proteome analysis of any organism -disease/pharmaceutical studies -comparative proteomics -protein-ligand/protein interactions -structure/functional proteomics -gene expression -methodology -bioinformatics -applications of proteomics
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