{"title":"Microaerobic dark fermentation by purple bacteria as an emerging perspective for biohydrogen production—a review","authors":"S. Krake, G. E. M. Tovar, S. Zibek","doi":"10.1186/s13068-026-02747-5","DOIUrl":null,"url":null,"abstract":"<div><p>While in recent years, a lot of research regarding microbial dark fermentation for biohydrogen production has been carried out focusing on improving well-established processes, this review aims to draw attention to the discovery of a new method of process control, i.e., microaerobic dark fermentation in purple non-sulfur bacteria. This new subsegment of research tries to rethink efficiencies of biohydrogen production and substrate conversion based on an increasingly comprehensive understanding of metabolic pathways, particularly in the area of interplay between aerobic and anaerobic metabolism and the control of this state. By combining hydrogen production through dark fermentation and partially activated photofermentation by a partially active nitrogenase (~ 12%), microaerobic fermentation has the potential to increase hydrogen efficiency. At the same time, it allows to maintain advantages of facultative aerobes, such as high-cell densities and growth rates. Studies show that very high yields of up to 8–12 mol H<sub>2</sub> mol<sup>−1</sup> substrate should theoretically be possible with this method, but the yields currently realized are still in the range already achieved with dark fermentation (0.2–1.6 mol H<sub>2</sub> mol<sup>−1</sup> substrate). This review provides an overview of the relevant bacteria, metabolism, cultivation, and challenges to further increase hydrogen productivity using microaerobic dark fermentation by purple bacteria. In addition, the model microorganism <i>Rhodospirillum rubrum</i> is considered in more detail to gain a deeper understanding of the processes at the metabolic level under microaerobic conditions. The review concludes with a detailed proposal of the challenges and opportunities to create a new, exciting perspective for biotechnological hydrogen production by microaerobic dark fermentation.</p></div>","PeriodicalId":494,"journal":{"name":"Biotechnology for Biofuels","volume":"19 1","pages":""},"PeriodicalIF":6.1000,"publicationDate":"2026-03-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1186/s13068-026-02747-5.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biotechnology for Biofuels","FirstCategoryId":"5","ListUrlMain":"https://link.springer.com/article/10.1186/s13068-026-02747-5","RegionNum":1,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2026/4/9 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
While in recent years, a lot of research regarding microbial dark fermentation for biohydrogen production has been carried out focusing on improving well-established processes, this review aims to draw attention to the discovery of a new method of process control, i.e., microaerobic dark fermentation in purple non-sulfur bacteria. This new subsegment of research tries to rethink efficiencies of biohydrogen production and substrate conversion based on an increasingly comprehensive understanding of metabolic pathways, particularly in the area of interplay between aerobic and anaerobic metabolism and the control of this state. By combining hydrogen production through dark fermentation and partially activated photofermentation by a partially active nitrogenase (~ 12%), microaerobic fermentation has the potential to increase hydrogen efficiency. At the same time, it allows to maintain advantages of facultative aerobes, such as high-cell densities and growth rates. Studies show that very high yields of up to 8–12 mol H2 mol−1 substrate should theoretically be possible with this method, but the yields currently realized are still in the range already achieved with dark fermentation (0.2–1.6 mol H2 mol−1 substrate). This review provides an overview of the relevant bacteria, metabolism, cultivation, and challenges to further increase hydrogen productivity using microaerobic dark fermentation by purple bacteria. In addition, the model microorganism Rhodospirillum rubrum is considered in more detail to gain a deeper understanding of the processes at the metabolic level under microaerobic conditions. The review concludes with a detailed proposal of the challenges and opportunities to create a new, exciting perspective for biotechnological hydrogen production by microaerobic dark fermentation.
期刊介绍:
Biotechnology for Biofuels is an open access peer-reviewed journal featuring high-quality studies describing technological and operational advances in the production of biofuels, chemicals and other bioproducts. The journal emphasizes understanding and advancing the application of biotechnology and synergistic operations to improve plants and biological conversion systems for the biological production of these products from biomass, intermediates derived from biomass, or CO2, as well as upstream or downstream operations that are integral to biological conversion of biomass.
Biotechnology for Biofuels focuses on the following areas:
• Development of terrestrial plant feedstocks
• Development of algal feedstocks
• Biomass pretreatment, fractionation and extraction for biological conversion
• Enzyme engineering, production and analysis
• Bacterial genetics, physiology and metabolic engineering
• Fungal/yeast genetics, physiology and metabolic engineering
• Fermentation, biocatalytic conversion and reaction dynamics
• Biological production of chemicals and bioproducts from biomass
• Anaerobic digestion, biohydrogen and bioelectricity
• Bioprocess integration, techno-economic analysis, modelling and policy
• Life cycle assessment and environmental impact analysis