Synthesis, spectroscopic characterization, and multiscale computational ınvestigation of a novel 1,2,4-triazole derivative targeting AChE, BChE, and COX enzymes

IF 2.2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY
Ahmet Harmankaya, Hilal Medetalibeyoğlu, Abdurrahman Atalay, Ahmet Buğra Ortaakarsu, Sevda Manap, Ebru Koca, Çiğdem Yıldız, Nejdet Köçek, Haydar Yüksek
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引用次数: 0

Abstract

In this study, a new 1,2,4-triazole derivative, 4-(((3-ethyl-5-oxo-1,5-dihydro-4H-1,2,4-triazol-4-yl)imino)methyl)-2-methoxyphenyl benzoate (MPB), was synthesized and structurally confirmed using FTIR, UV–Vis, and 1H and 13C-NMR spectroscopy. The electronic properties were examined at the B3LYP/6-311G(d,p) level through frontier molecular orbital (FMO) analysis, which revealed a HOMO–LUMO gap of 4.36 eV, indicating significant kinetic stability. Nonlinear optical (NLO) analyses revealed a first-order hyperpolarizability (βtot) of 2.09 × 10−30 esu, approximately 11 times greater than that of urea, suggesting strong NLO potential. Global reactivity descriptors showed a high ionization potential (6.18 eV), electron affinity (1.82 eV), and electrophilicity index (8.25 eV), indicating MPB’s stability and moderate reactivity. MEP, ELF, and LOL analyses highlighted electrophilic and nucleophilic regions of MPB. Molecular docking studies demonstrated that MPB binds effectively to acetylcholinesterase (AChE), butyrylcholinesterase (BChE), and cyclooxygenases (COX-1 and COX-2), with interactions including ππ stacking (e.g., with Trp86, Phe297, and Tyr385) and multiple hydrogen bonds. Induced Fit Docking revealed conformational adaptability within the active sites. Molecular dynamics (MD) simulations over 200 ns confirmed the structural stability of MPB–protein complexes, with RMSD values around 1.5–2.0 Å. Markov State Model analyses (PCA, TICA-FES) further revealed distinct energy landscapes and conformational constraints, particularly for AChE and BChE, where MPB showed superior stability compared to reference inhibitors. These findings underscore MPB’s potential as a multifunctional pharmacophore with notable enzyme-inhibitory capabilities.

一种新的1,2,4-三唑衍生物的合成,光谱表征和多尺度计算ınvestigation靶向AChE, BChE和COX酶
本研究合成了一种新的1,2,4-三唑衍生物,4-((3-乙基-5-氧-1,5-二氢- 4h -1,2,4-三唑-4-基)亚氨基)甲基)-2-甲氧基苯甲酸酯(MPB),并通过FTIR、UV-Vis、1H和13C-NMR进行了结构证实。通过前沿分子轨道(FMO)分析,在B3LYP/6-311G(d,p)水平上检测了电子性质,发现HOMO-LUMO间隙为4.36 eV,表明具有显著的动力学稳定性。非线性光学(NLO)分析表明,一阶超极化率(βtot)为2.09 × 10−30 esu,约为尿素的11倍,表明具有很强的NLO潜力。总体反应性描述符显示出较高的电离势(6.18 eV)、电子亲和性(1.82 eV)和亲电性指数(8.25 eV),表明MPB的稳定性和中等反应性。MEP, ELF和LOL分析突出了MPB的亲电和亲核区域。分子对接研究表明,MPB与乙酰胆碱酯酶(AChE)、丁基胆碱酯酶(BChE)和环氧合酶(COX-1和COX-2)有效结合,相互作用包括π -π堆叠(如与Trp86、Phe297和Tyr385)和多个氢键。诱导契合对接揭示了活性位点的构象适应性。超过200 ns的分子动力学(MD)模拟证实了mpb -蛋白复合物的结构稳定性,RMSD值约为1.5-2.0 Å。马尔科夫状态模型分析(PCA, TICA-FES)进一步揭示了不同的能量格局和构象约束,特别是对于AChE和BChE, MPB与参考抑制剂相比表现出更高的稳定性。这些发现强调了MPB作为一种具有显著酶抑制能力的多功能药效团的潜力。
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来源期刊
Structural Chemistry
Structural Chemistry 化学-化学综合
CiteScore
3.80
自引率
11.80%
发文量
227
审稿时长
3.7 months
期刊介绍: Structural Chemistry is an international forum for the publication of peer-reviewed original research papers that cover the condensed and gaseous states of matter and involve numerous techniques for the determination of structure and energetics, their results, and the conclusions derived from these studies. The journal overcomes the unnatural separation in the current literature among the areas of structure determination, energetics, and applications, as well as builds a bridge to other chemical disciplines. Ist comprehensive coverage encompasses broad discussion of results, observation of relationships among various properties, and the description and application of structure and energy information in all domains of chemistry. We welcome the broadest range of accounts of research in structural chemistry involving the discussion of methodologies and structures,experimental, theoretical, and computational, and their combinations. We encourage discussions of structural information collected for their chemicaland biological significance.
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