A new series of pyrazoles-based compounds: synthesis, HOMO–LUMO analysis, MEP, quantum reactivity, and in silico covid-19 activity

IF 2.2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY
Nazenin Akın, Yasemin Sunucu-Karafakıoğlu, Senem Akkoc, Mehran Feizi-Dehnayebi, Eyüp Başaran, Ilhan Ozer Ilhan
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引用次数: 0

Abstract

In the present study, we synthesized four new pyrazole-based compounds with yields of 80%, 70%, 56% and 60% for compounds 2–5, respectively. All compounds were characterized by spectroscopic methods. Density functional theory (DFT) calculations were performed to investigate the electronic and quantum chemical properties of the newly synthesized compounds. The optimized geometries obtained from DFT analysis were used to examine the active sites of the compounds through MEP diagrams. Furthermore, the differences in the HOMO–LUMO energy levels were analyzed to assess the biological activity, chemical reactivity, and stability of the molecules. Additional quantum reactivity descriptors were evaluated based on the molecular orbital energies. In parallel, an in silico docking study was conducted to explore the biological activity of the synthesized compounds against the COVID-19 receptor. Among the synthesized compounds, compound 3 not only showed the most favorable electronic properties (smallest energy gap: 1.17 eV and highest ω: 23.31 eV) but also exhibited the lowest binding energy (–4.43 kcal/mol) in docking studies, indicating strong and stable binding to the 6LU7 protease active site. The combined results from DFT calculations, docking studies and ADME-Tox profiling provide valuable insights into the electronic properties, reactivity, and potential biological applications of the synthesized compounds.

Abstract Image

一系列新的吡唑类化合物:合成、HOMO-LUMO分析、MEP、量子反应性和在硅中的covid-19活性
在本研究中,我们合成了4个新的吡唑基化合物,化合物2-5的产率分别为80%、70%、56%和60%。所有化合物都用光谱方法进行了表征。用密度泛函理论(DFT)计算了新合成化合物的电子和量子化学性质。利用DFT分析得到的优化几何形状,通过MEP图检测化合物的活性位点。此外,还分析了HOMO-LUMO能级的差异,以评估分子的生物活性、化学反应性和稳定性。根据分子轨道能量对其他量子反应性描述符进行了评价。同时进行了硅对接研究,以探索合成的化合物对COVID-19受体的生物活性。在对接研究中,化合物3不仅表现出最有利的电子性质(最小能隙为1.17 eV,最高ω为23.31 eV),而且还表现出最低的结合能(-4.43 kcal/mol),表明其与6LU7蛋白酶活性位点的结合强而稳定。DFT计算、对接研究和ADME-Tox分析的综合结果为合成化合物的电子性质、反应性和潜在的生物应用提供了有价值的见解。
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来源期刊
Structural Chemistry
Structural Chemistry 化学-化学综合
CiteScore
3.80
自引率
11.80%
发文量
227
审稿时长
3.7 months
期刊介绍: Structural Chemistry is an international forum for the publication of peer-reviewed original research papers that cover the condensed and gaseous states of matter and involve numerous techniques for the determination of structure and energetics, their results, and the conclusions derived from these studies. The journal overcomes the unnatural separation in the current literature among the areas of structure determination, energetics, and applications, as well as builds a bridge to other chemical disciplines. Ist comprehensive coverage encompasses broad discussion of results, observation of relationships among various properties, and the description and application of structure and energy information in all domains of chemistry. We welcome the broadest range of accounts of research in structural chemistry involving the discussion of methodologies and structures,experimental, theoretical, and computational, and their combinations. We encourage discussions of structural information collected for their chemicaland biological significance.
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