Theoretical exploration of iseluxine as a promising natural antioxidant

IF 2.5 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Hoang Thi Tue Trang, Nguyen Ngoc Anh Thu, Nguyen Xuan Ha
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引用次数: 0

Abstract

Context

Iseluxine (ISL), an isoquinolinone alkaloid derived from Iseia luxurians, exhibits remarkable antioxidant potential, surpassing conventional antioxidants such as vitamin C and BHA in vitro. To clarify its radical-scavenging behavior, density functional theory (DFT) calculations were conducted against key reactive oxygen and nitrogen species (ROS and RNS), including HO, CH₃O, CH₃OO, HOO, NO, NO₂, and O₂•–. Three mechanisms, formal hydrogen atom transfer (fHAT), sequential electron transfer–proton transfer (SETPT), and sequential proton loss–electron transfer (SPLET) were examined in gas, water, and lipid-like (pentylethanoate) media. Thermodynamic analysis identified the O6–H bond as the most reactive site due to its low bond dissociation enthalpy and proton affinity. Kinetic modeling indicated efficient HOO scavenging via the SET pathway in water, with a rate constant of 1.8 × 106 M⁻1 s⁻1, significantly higher than that of Trolox. ISL also showed strong activity against CH₃O, CH₃OO, and NO₂, but limited reactivity toward NO, and O₂•–, emphasizing its selective antioxidant potential.

Methods

Density functional theory (DFT) calculations were performed using the M06-2X functional with the 6-31G(d,p)//6–311 +  + G(d,p) basis set for single-point energy, geometry optimizations and kinetic calculations. Thermodynamic and kinetic parameters were obtained following the QM-ORSA protocol, combined with the SMD solvation model to simulate aqueous and pentylethanoate media.

Abstract Image

异亮氨酸作为天然抗氧化剂的理论探索。
背景:Iseluxine (ISL)是一种从鸢尾草中提取的异喹啉类生物碱,具有显著的抗氧化潜力,其体外抗氧化能力超过了维生素C和BHA等常规抗氧化剂。为了阐明其自由基清除行为,对主要活性氧和氮种(ROS和RNS)进行了密度泛函理论(DFT)计算,包括HO•、CH₃O•、CH₃OO•、HOO•、NO•、NO₂•和O₂•-。三种机制,形式氢原子转移(fHAT),顺序电子转移-质子转移(SETPT)和顺序质子损失-电子转移(SPLET)在气体,水和类脂质(戊乙烷)介质中进行了研究。热力学分析表明,由于O6-H键具有较低的键解离焓和质子亲和力,因此它是反应性最强的位点。动力学模型表明,通过SET途径在水中有效清除HOO•毒血症,其速率常数为1.8 × 106 M - 1 s - 1,明显高于Trolox。ISL对CH₃O•、CH₃OO•和NO₂也表现出较强的活性,但对NO和O₂•-的活性有限,强调了它的选择性抗氧化潜力。方法:采用M06-2X泛函,以6-31G(d,p)//6-311 + + G(d,p)为单点能量、几何优化和动力学计算基,进行密度泛函理论(DFT)计算。根据QM-ORSA协议获得了热力学和动力学参数,并结合SMD溶剂化模型模拟了水介质和戊乙醇酸介质。
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来源期刊
Journal of Molecular Modeling
Journal of Molecular Modeling 化学-化学综合
CiteScore
3.50
自引率
4.50%
发文量
362
审稿时长
2.9 months
期刊介绍: The Journal of Molecular Modeling focuses on "hardcore" modeling, publishing high-quality research and reports. Founded in 1995 as a purely electronic journal, it has adapted its format to include a full-color print edition, and adjusted its aims and scope fit the fast-changing field of molecular modeling, with a particular focus on three-dimensional modeling. Today, the journal covers all aspects of molecular modeling including life science modeling; materials modeling; new methods; and computational chemistry. Topics include computer-aided molecular design; rational drug design, de novo ligand design, receptor modeling and docking; cheminformatics, data analysis, visualization and mining; computational medicinal chemistry; homology modeling; simulation of peptides, DNA and other biopolymers; quantitative structure-activity relationships (QSAR) and ADME-modeling; modeling of biological reaction mechanisms; and combined experimental and computational studies in which calculations play a major role.
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