Prebiotic Roles of Formaldehyde as an Activating Agent and a Building Block in Solid-State Peptide Modification.

IF 3.5 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
ACS Bio & Med Chem Au Pub Date : 2025-09-18 eCollection Date: 2025-12-17 DOI:10.1021/acsbiomedchemau.5c00167
Jamie C Thuan, Anuja Koirala, James Pirez, Jun Ohata
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引用次数: 0

Abstract

Signal transduction by gaseous small molecules is an essential process in modern living systems, where the gasotransmitters relay cellular signals to bio-(macro)-molecules through covalent bond formation. However, the origin or a primordial version of such signaling events in abiotic worlds has been poorly understood to date. Through examination of chemical reactivities between formaldehyde and cyclic dipeptide/diketopiperazine derivatives in prebiotically relevant solid-state environments, this study demonstrates that the gaseous small molecule may serve not only as a mere building block for the abiotic construction of biomolecules but also as an activating agent that transforms the inert peptide into reactive, prebiotically important chemical species. In addition, superiority of solid-state reactions or mechanochemistry to solution-based reaction conditions described in this article may be an indication of potential significance of the mechanical force-induced chemistry for chemical evolution, in particular for abiotic emergence of polypeptides.

甲醛在固态肽修饰中作为活化剂和构建块的益生元作用。
气体小分子的信号转导是现代生命系统中必不可少的过程,其中气体递质通过形成共价键将细胞信号传递给生物(宏观)分子。然而,迄今为止,这种信号事件在非生物世界中的起源或原始版本仍然知之甚少。通过检测甲醛与环二肽/二酮哌嗪衍生物在益生元相关的固态环境中的化学反应性,本研究表明,气态小分子不仅可以作为生物分子非生物结构的简单构建块,还可以作为将惰性肽转化为活性的、益生元重要化学物质的活化剂。此外,固态反应或机械化学相对于本文所描述的基于溶液的反应条件的优势,可能表明机械力诱导化学对化学进化的潜在意义,特别是对多肽的非生物出现。
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来源期刊
ACS Bio & Med Chem Au
ACS Bio & Med Chem Au 药物、生物、化学-
CiteScore
4.10
自引率
0.00%
发文量
0
期刊介绍: ACS Bio & Med Chem Au is a broad scope open access journal which publishes short letters comprehensive articles reviews and perspectives in all aspects of biological and medicinal chemistry. Studies providing fundamental insights or describing novel syntheses as well as clinical or other applications-based work are welcomed.This broad scope includes experimental and theoretical studies on the chemical physical mechanistic and/or structural basis of biological or cell function in all domains of life. It encompasses the fields of chemical biology synthetic biology disease biology cell biology agriculture and food natural products research nucleic acid biology neuroscience structural biology and biophysics.The journal publishes studies that pertain to a broad range of medicinal chemistry including compound design and optimization biological evaluation molecular mechanistic understanding of drug delivery and drug delivery systems imaging agents and pharmacology and translational science of both small and large bioactive molecules. Novel computational cheminformatics and structural studies for the identification (or structure-activity relationship analysis) of bioactive molecules ligands and their targets are also welcome. The journal will consider computational studies applying established computational methods but only in combination with novel and original experimental data (e.g. in cases where new compounds have been designed and tested).Also included in the scope of the journal are articles relating to infectious diseases research on pathogens host-pathogen interactions therapeutics diagnostics vaccines drug-delivery systems and other biomedical technology development pertaining to infectious diseases.
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