Dependence of the amplification factor on the body water deuterium enrichment

IF 1.7 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS
Journal of immunological methods Pub Date : 2026-01-01 Epub Date: 2025-12-02 DOI:10.1016/j.jim.2025.114010
Erdem Şanal , Julia Drylewicz , Kiki Tesselaar , Becca Asquith , José A.M. Borghans , Rob J. de Boer
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引用次数: 0

Abstract

Heavy water (D2O) labeling is the state-of-the-art technique to track the dynamics of circulating cells in vivo. D2O labels dividing cells through incorporation of deuterium into newly synthesized DNA, which is measured using GC/MS. The labeling rate depends on (1) the level of body water enrichment, (2) cell kinetics, and (3) an amplification factor quantifying the deoxyribose enrichment relative to the body water enrichment. This amplification factor is typically estimated using a reference population undergoing rapid turnover (such as granulocytes), and is larger than one because deoxyribose contains seven hydrogens that can be replaced by deuterium. In a meta-analysis, we found that individuals differ markedly in this amplification factor. Since the amplification factor also depends on the level of body water enrichment, we use conventional binomial expressions to describe the fractions of deoxyribose incorporating zero, one, two, or more deuterium atoms. We extend this classic binomial model with a new parameter, 0<γ<1, describing the relative contribution of hydrogens from body water during deoxyribose synthesis. While for most studies, our ‘novel Binomial’ model reasonably explains the slope with which the amplification factor declines with the level of body water enrichment, we find that some individual amplification factors differ considerably from their expected values Re-fitting deuterium labeling data of granulocytes with the Binomial model reveals that the actual decrease is steeper than expected. We speculate that this residual variation depends on differences in diet, metabolism, and/or life style, which apparently correlate with daily fluid intake.
放大因子对水体氘富集的影响。
重水(D2O)标记是跟踪体内循环细胞动力学的最先进技术。D2O通过将氘掺入新合成的DNA来标记分裂细胞,用GC/MS测量。标记率取决于(1)体内水分富集水平,(2)细胞动力学,以及(3)量化相对于体内水分富集的脱氧核糖富集的扩增因子。这个放大因子通常是用快速更替的参考种群(如粒细胞)来估计的,它大于1,因为脱氧核糖含有7个氢原子,可以被氘取代。在荟萃分析中,我们发现个体在这一放大因子上存在显著差异。由于放大因子也取决于水体富集水平,我们使用传统的二项式表达式来描述含有零、一个、两个或更多氘原子的脱氧核糖的分数。我们用一个新参数0扩展这个经典的二项式模型
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来源期刊
CiteScore
4.10
自引率
0.00%
发文量
120
审稿时长
3 months
期刊介绍: The Journal of Immunological Methods is devoted to covering techniques for: (1) Quantitating and detecting antibodies and/or antigens. (2) Purifying immunoglobulins, lymphokines and other molecules of the immune system. (3) Isolating antigens and other substances important in immunological processes. (4) Labelling antigens and antibodies. (5) Localizing antigens and/or antibodies in tissues and cells. (6) Detecting, and fractionating immunocompetent cells. (7) Assaying for cellular immunity. (8) Documenting cell-cell interactions. (9) Initiating immunity and unresponsiveness. (10) Transplanting tissues. (11) Studying items closely related to immunity such as complement, reticuloendothelial system and others. (12) Molecular techniques for studying immune cells and their receptors. (13) Imaging of the immune system. (14) Methods for production or their fragments in eukaryotic and prokaryotic cells. In addition the journal will publish articles on novel methods for analysing the organization, structure and expression of genes for immunologically important molecules such as immunoglobulins, T cell receptors and accessory molecules involved in antigen recognition, processing and presentation. Submitted full length manuscripts should describe new methods of broad applicability to immunology and not simply the application of an established method to a particular substance - although papers describing such applications may be considered for publication as a short Technical Note. Review articles will also be published by the Journal of Immunological Methods. In general these manuscripts are by solicitation however anyone interested in submitting a review can contact the Reviews Editor and provide an outline of the proposed review.
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