Zha-Long Ye, Xiang-Yi Li, Man-Li Nong, Xiao-Mei Sun, Wanfeng Li
{"title":"The age-related expression patterns of <i>Larix kaempferi</i> <i>AP2</i> subfamily genes and functional dissection of <i>LkTOE1-2</i> in seed formation and germination.","authors":"Zha-Long Ye, Xiang-Yi Li, Man-Li Nong, Xiao-Mei Sun, Wanfeng Li","doi":"10.48130/forres-0025-0028","DOIUrl":null,"url":null,"abstract":"<p><p>Conifers pose challenges for breeding programs due to their extended vegetative phases. Despite the critical role of <i>APETALA2</i> (<i>AP2</i>) in regulating phase transitions, the <i>AP2</i>/<i>ERF</i> superfamily remains largely unexplored in gymnosperms. Here, the first genome-wide analysis of the <i>AP2</i>/<i>ERF</i> superfamily in a conifer, <i>Larix kaempferi</i> (Japanese larch) is presented, and 374 members were identified. Among all eight paralogs, four <i>euAP2</i> lineage genes, <i>TARGET OF EATs</i> (<i>TOEs</i>), exhibit age-decreased expression patterns. Functional characterization of <i>LkTOE1-2</i> demonstrates its involvement in somatic embryogenesis and seed germination. Importantly, the RUBY reporter system confirmed an enhanced promoter activity in somatic embryo maturation. Over-expression of <i>LkTOE1-2</i> in <i>Arabidopsis</i> accelerates seed germination by 23.77%, bolting by 6.93%, and flowering by 5.92%. This study provides not only an expanded genomic resource for gymnosperms but also a candidate gene (<i>LkTOE1-2</i>) to shorten the juvenile phase of larch via molecular breeding.</p>","PeriodicalId":520285,"journal":{"name":"Forestry research","volume":"5 ","pages":"e027"},"PeriodicalIF":4.8000,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12648160/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Forestry research","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.48130/forres-0025-0028","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Conifers pose challenges for breeding programs due to their extended vegetative phases. Despite the critical role of APETALA2 (AP2) in regulating phase transitions, the AP2/ERF superfamily remains largely unexplored in gymnosperms. Here, the first genome-wide analysis of the AP2/ERF superfamily in a conifer, Larix kaempferi (Japanese larch) is presented, and 374 members were identified. Among all eight paralogs, four euAP2 lineage genes, TARGET OF EATs (TOEs), exhibit age-decreased expression patterns. Functional characterization of LkTOE1-2 demonstrates its involvement in somatic embryogenesis and seed germination. Importantly, the RUBY reporter system confirmed an enhanced promoter activity in somatic embryo maturation. Over-expression of LkTOE1-2 in Arabidopsis accelerates seed germination by 23.77%, bolting by 6.93%, and flowering by 5.92%. This study provides not only an expanded genomic resource for gymnosperms but also a candidate gene (LkTOE1-2) to shorten the juvenile phase of larch via molecular breeding.