Investigation of Intermolecular Interaction Between 4-Ethyl Phenyl Sulfate and Human Serum Albumin Using Spectroscopic Techniques and Molecular Docking Studies

IF 2.7 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Harsha Verma, Payal Gulati, Tabarak Malik, Awadhesh Kumar Verma, Anupam Teotia,  Archana, G. B. V. S. Lakshmi, Mohd Tariq, Jyoti Jaiswal, Manish Kushwaha, Pratima R. Solanki, Rajeev Singh, Anil Kumar
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引用次数: 0

Abstract

4-Ethyl phenyl sulfate (4-EPS), a gut microbiota-derived metabolite, is identified in ailments like chronic kidney disease (CKD) and numerous neurodegenerative conditions like autism spectrum disorders (ASD). This study is a novel attempt to comprehend the interaction of 4-ethyl phenyl sulfate (4-EPS) with human serum albumin (HSA). This interaction was examined using spectroscopic techniques like circular dichroism (CD), Fourier transform infrared (FTIR), UV–vis absorption, fluorescence spectroscopy, and molecular docking studies. The conformation investigation through FTIR and CD confirmed the alteration in the secondary structure of HSA due to the binding of 4-EPS. Fluorescence spectroscopy revealed the formation of a complex between HSA and 4-EPS upon interaction via static quenching. The spontaneity of the binding process was indicated by the negative ΔG value. Absorption spectroscopy demonstrated that in the presence of 4-EPS (2–48 μM), the absorbance of HSA progressively declined as a result of the formation of the 4-EPS–HSA complex. Contact angle measurements showed the involvement of hydrophobic interactions between HSA and 4-EPS. Molecular modeling was performed, followed by optimization using the DFT approach. Molecular docking study revealed moderate binding between the metabolite and HSA. It was further confirmed that hydrophobic interaction and hydrogen bonds were the main forces responsible for stabilizing the 4-EPS–HSA complex.

利用光谱技术和分子对接研究硫酸4-乙基苯基与人血清白蛋白分子间相互作用。
4-乙基苯基硫酸盐(4-EPS)是一种肠道微生物衍生的代谢物,在慢性肾病(CKD)和许多神经退行性疾病(如自闭症谱系障碍(ASD))中被发现。本研究是了解4-乙基苯基硫酸酯(4-EPS)与人血清白蛋白(HSA)相互作用的新尝试。这种相互作用是通过诸如圆二色性(CD)、傅里叶变换红外(FTIR)、紫外-可见吸收、荧光光谱和分子对接研究等光谱技术来检测的。FTIR和CD的构象研究证实了HSA二级结构的改变是由于4-EPS的结合。荧光光谱显示,HSA与4-EPS通过静态猝灭相互作用形成络合物。结合过程的自发性由负ΔG值表示。吸收光谱结果表明,在4-EPS (2-48 μM)存在下,HSA的吸光度逐渐下降,形成4-EPS-HSA络合物。接触角测量表明HSA和4-EPS之间存在疏水相互作用。进行了分子建模,然后利用DFT方法进行了优化。分子对接研究表明,代谢产物与HSA有中等程度的结合。进一步证实疏水相互作用和氢键是稳定4-EPS-HSA配合物的主要力量。
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来源期刊
Journal of Molecular Recognition
Journal of Molecular Recognition 生物-生化与分子生物学
CiteScore
4.60
自引率
3.70%
发文量
68
审稿时长
2.7 months
期刊介绍: Journal of Molecular Recognition (JMR) publishes original research papers and reviews describing substantial advances in our understanding of molecular recognition phenomena in life sciences, covering all aspects from biochemistry, molecular biology, medicine, and biophysics. The research may employ experimental, theoretical and/or computational approaches. The focus of the journal is on recognition phenomena involving biomolecules and their biological / biochemical partners rather than on the recognition of metal ions or inorganic compounds. Molecular recognition involves non-covalent specific interactions between two or more biological molecules, molecular aggregates, cellular modules or organelles, as exemplified by receptor-ligand, antigen-antibody, nucleic acid-protein, sugar-lectin, to mention just a few of the possible interactions. The journal invites manuscripts that aim to achieve a complete description of molecular recognition mechanisms between well-characterized biomolecules in terms of structure, dynamics and biological activity. Such studies may help the future development of new drugs and vaccines, although the experimental testing of new drugs and vaccines falls outside the scope of the journal. Manuscripts that describe the application of standard approaches and techniques to design or model new molecular entities or to describe interactions between biomolecules, but do not provide new insights into molecular recognition processes will not be considered. Similarly, manuscripts involving biomolecules uncharacterized at the sequence level (e.g. calf thymus DNA) will not be considered.
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