Genomic landscape of radiation-induced somatic mutations in a normal cell.

IF 3.8 3区 医学 Q2 ONCOLOGY
Yukiko Matsuda, Osamu Tanabe
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引用次数: 0

Abstract

Atomic bomb survivors have been found to have an excess risk of late adverse effects, including leukemia, various solid cancers, and non-cancer diseases, depending on the dose of radiation exposure. Radiation-induced DNA damage can lead to errors in DNA repair, resulting in the induction of somatic mutations in cells. Since these mutations are thought to contribute to an increased risk of radiation-induced carcinogenesis, various approaches, such as mutation analysis at specific genetic loci and chromosomal analysis, have been used to investigate their characteristics. However, previous methods were only capable of detecting a subset of radiation-induced mutations, making it difficult to quantitatively and comprehensively capture their specificity, including the mutation spectrum. Recently, whole-genome sequencing combined with of ex vivo single-cell culture has enabled a comprehensive analysis of radiation-induced mutations in individual cells. Such studies, including our own, have demonstrated that short, non-repeat deletions occurring outside of tandem repeats represent the most distinctive signature of radiation-induced mutagenesis, showing clear dose dependence and consistency across multiple tissues. Structural variants (excluding retroelement insertions) and multisite mutations also showed radiation specificity, albeit to a lesser extent and at a lower frequency than non-repeat deletions. These findings may offer insights into the molecular mechanisms underlying radiation-induced oncogenesis and non-cancer disease development.

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正常细胞中辐射诱导的体细胞突变的基因组景观。
据发现,原子弹幸存者后期不良影响的风险过高,包括白血病、各种实体癌和非癌症疾病,这取决于辐射照射的剂量。辐射诱导的DNA损伤可导致DNA修复错误,导致细胞中体细胞突变的诱导。由于这些突变被认为有助于增加辐射致癌的风险,各种方法,如特定基因位点的突变分析和染色体分析,已被用于研究其特征。然而,以前的方法只能检测辐射诱导突变的一个子集,因此难以定量和全面地捕获它们的特异性,包括突变谱。最近,全基因组测序与离体单细胞培养相结合,使单个细胞辐射诱导突变的综合分析成为可能。这些研究,包括我们自己的研究,已经证明,短的,非重复序列缺失发生在串联重复序列之外,代表了辐射诱导诱变的最独特的特征,在多个组织中显示出明确的剂量依赖性和一致性。结构变异(不包括逆转录元件插入)和多位点突变也显示出辐射特异性,尽管其程度和频率低于非重复缺失。这些发现可能为辐射诱导的肿瘤发生和非癌症疾病发展的分子机制提供见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Carcinogenesis
Carcinogenesis 医学-肿瘤学
CiteScore
9.20
自引率
2.10%
发文量
95
审稿时长
1 months
期刊介绍: Carcinogenesis: Integrative Cancer Research is a multi-disciplinary journal that brings together all the varied aspects of research that will ultimately lead to the prevention of cancer in man. The journal publishes papers that warrant prompt publication in the areas of Biology, Genetics and Epigenetics (including the processes of promotion, progression, signal transduction, apoptosis, genomic instability, growth factors, cell and molecular biology, mutation, DNA repair, genetics, etc.), Cancer Biomarkers and Molecular Epidemiology (including genetic predisposition to cancer, and epidemiology), Inflammation, Microenvironment and Prevention (including molecular dosimetry, chemoprevention, nutrition and cancer, etc.), and Carcinogenesis (including oncogenes and tumor suppressor genes in carcinogenesis, therapy resistance of solid tumors, cancer mouse models, apoptosis and senescence, novel therapeutic targets and cancer drugs).
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