Exploring the therapeutic role of thiabendazole in lung adenocarcinoma via network pharmacology and single-cell analysis.

IF 4.1 2区 医学 Q1 ONCOLOGY
Wanghong Qi, Guoqiu Xu, Lang Tang, Chunlin Ye, Xi Liu
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引用次数: 0

Abstract

Background: Lung adenocarcinoma (LUAD) is the leading cause of cancer-related deaths globally, with over 2.2 million new cases in 2020. Despite advances in targeted therapies, challenges such as drug resistance and severe side effects persist. Thiabendazole, an antiparasitic drug, has shown potential anticancer effects in LUAD.

Methods: This study used network pharmacology, integrating single-cell RNA sequencing (scRNA-seq) data (GSE136103), GEO transcriptome datasets (GSE10072, GSE19188, GSE19804, GSE30219, GSE40791), and bioinformatics tools to explore Thiabendazole's mechanisms in LUAD. Potential targets were predicted through PubChem and SwissTargetPrediction. scRNA-seq data were analyzed using Seurat, and key genes and pathways were identified via Weighted Gene Co-expression Network Analysis (WGCNA) and multi-omics integration. Diagnostic genes were further screened using LASSO regression, Support Vector Machine (SVM), and random forest (RF) models.

Results: Single-cell analysis revealed macrophages as key targets of Thiabendazole. Transcriptomic analysis identified 2034 downregulated and 2388 upregulated genes. WGCNA found a core gene module (MEred) strongly correlated with Thiabendazole (r = 0.75, p = 2e-07). Four diagnostic genes-ACE, ALDOA, MME, and PMP22-showed high accuracy (0.982). Thiabendazole also modulated immune cell infiltration, particularly affecting macrophage activity. Molecular docking confirmed stable binding to ACE, ALDOA, and MME.

Conclusion: Thiabendazole demonstrates promising anticancer potential in LUAD, influencing key genes and immune pathways. It may serve as an effective therapeutic agent targeting both cancer cells and the tumor microenvironment.

通过网络药理学和单细胞分析探讨噻苯达唑对肺腺癌的治疗作用。
背景:肺腺癌(LUAD)是全球癌症相关死亡的主要原因,2020年新发病例超过220万。尽管靶向治疗取得了进展,但耐药性和严重副作用等挑战仍然存在。噻苯达唑是一种抗寄生虫药物,在LUAD中显示出潜在的抗癌作用。方法:本研究采用网络药理学方法,整合单细胞RNA测序(scRNA-seq)数据(GSE136103)、GEO转录组数据集(GSE10072、GSE19188、GSE19804、GSE30219、GSE40791)和生物信息学工具,探讨噻苯达唑在LUAD中的作用机制。通过PubChem和SwissTargetPrediction预测潜在目标。使用Seurat分析scRNA-seq数据,通过加权基因共表达网络分析(Weighted Gene Co-expression Network Analysis, WGCNA)和多组学整合鉴定关键基因和通路。使用LASSO回归、支持向量机(SVM)和随机森林(RF)模型进一步筛选诊断基因。结果:单细胞分析显示巨噬细胞是噻苯达唑的主要靶点。转录组学分析鉴定出2034个下调基因和2388个上调基因。WGCNA发现核心基因模块(meed)与噻苯达唑密切相关(r = 0.75, p = 2e-07)。ace、ALDOA、MME、pmp22 4个诊断基因准确率较高(0.982)。噻苯达唑还能调节免疫细胞浸润,特别是影响巨噬细胞的活性。分子对接证实噻苯达唑与ACE、ALDOA和mme稳定结合。结论:噻苯达唑在LUAD中具有良好的抗癌潜力,影响关键基因和免疫途径。它可以作为一种有效的靶向癌细胞和肿瘤微环境的治疗剂。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Translational Oncology
Translational Oncology Biochemistry, Genetics and Molecular Biology-Cancer Research
CiteScore
7.20
自引率
2.00%
发文量
314
审稿时长
6-12 weeks
期刊介绍: Translational Oncology publishes the results of novel research investigations which bridge the laboratory and clinical settings including risk assessment, cellular and molecular characterization, prevention, detection, diagnosis and treatment of human cancers with the overall goal of improving the clinical care of oncology patients. Translational Oncology will publish laboratory studies of novel therapeutic interventions as well as clinical trials which evaluate new treatment paradigms for cancer. Peer reviewed manuscript types include Original Reports, Reviews and Editorials.
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