Dynamic Pathway Regulation Using a Quorum-Sensing Circuit to Improve the Production of L-Homoserine in Escherichia coli.

IF 3.9 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Kun Niu, Miao Zhang, Yi-Ming Kong, Yi-Fan Zhao, Le-Tian Tan, Fa-Man Lu, Zhi-Qiang Liu, Yu-Guo Zheng
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Abstract

L-Homoserine has diverse applications in the fields of agrochemicals, pharmaceuticals, and animal feed; therefore, microbial fermentation using engineered cell factories has attracted widespread and intense attention. In this study, the nonauxotrophic strain for higher L-homoserine production was developed based on the previously constructed strain Escherichia coli HS. First, key genes involved in the biosynthesis pathways of essential amino acids were replenished with different strategies to address the growth deficiencies. Subsequently, carbon flux through the l-aspartate to L-homoserine was amplified by thrA overexpression. Furthermore, the supply of NADPH and ATP was optimized to synergistically enhance L-homoserine biosynthesis. Finally, the quorum sensing (QS) system esaI/esaR from Pantoea stewartii was introduced to dynamically regulate the carbon flux of l-threonine biosynthesis. And the results indicated that optimizing the regulatory efficiency of the QS system triggered autonomous downregulation of thrB during the high-cell-density phase, achieving a balanced metabolic flux competition between the l-threonine and L-homoserine biosynthesis pathways. The QS-regulated strain E. coli HS27/PA-P7QS produced 101.81 g/L L-homoserine with a yield of 0.41 g/g glucose after 96 h of fermentation in a 5-L bioreactor. This study demonstrates the feasibility of applying the QS system in E. coli for metabolic flux control, thereby providing novel insights into the rational design of amino acid biosynthesis pathways.

利用群体感应电路提高大肠杆菌l -高丝氨酸产量的动态途径调控。
l -同型丝氨酸在农用化学品、制药、动物饲料等领域有着广泛的应用;因此,利用工程细胞工厂进行微生物发酵引起了广泛而强烈的关注。在本研究中,以先前构建的大肠杆菌HS为基础,开发了高产l -高丝氨酸的非营养不良菌株。首先,通过不同的策略补充参与必需氨基酸生物合成途径的关键基因来解决生长缺陷。随后,通过l-天冬氨酸到l-高丝氨酸的碳通量被thrA过表达放大。此外,优化了NADPH和ATP的供应,协同促进l -高丝氨酸的生物合成。最后,引入泛藻群体感应系统esaI/esaR,对l-苏氨酸生物合成过程中的碳通量进行动态调节。结果表明,优化QS系统的调控效率可以在高密度期触发thrB的自主下调,实现l-苏氨酸和l-同型丝氨酸生物合成途径之间平衡的代谢通量竞争。菌株HS27/PA-P7QS在5-L的生物反应器中发酵96 h,产生101.81 g/L的L-同型丝氨酸,葡萄糖产量为0.41 g/g。本研究证明了QS系统应用于大肠杆菌代谢通量控制的可行性,从而为氨基酸生物合成途径的合理设计提供了新的见解。
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来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
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