Testing the limits: serial crystallography using unpatterned fixed targets

IF 3.5 2区 材料科学 Q2 CHEMISTRY, MULTIDISCIPLINARY
IUCrJ Pub Date : 2025-11-01 Epub Date: 2025-10-13 DOI:10.1107/S2052252525008371
Alexander Gorel , Robert L. Shoeman , Elisabeth Hartmann , Stanislaw Nizinski , Martin V. Appleby , Emma V. Beale , Florian Dworkowski , Guillaume C. Gotthard , John H. Beale , James Holton , R. Bruce Doak , Thomas R. M. Barends , Ilme Schlichting
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引用次数: 0

Abstract

The influence of the X-ray step size on radiation damage occurring in serial data collection from a metalloprotein using sheet-on-sheet fixed-target chips was investigated at fourth-generation synchrotron and XFEL beamlines.
Sheet-on-sheet (SOS) fixed-target chips are arguably the most versatile, cheapest and simplest sample-delivery method for ambient-temperature data acquisition using serial crystallography approaches at synchrotrons and X-ray free-electron lasers (XFELs). Their defining feature, the absence of any hard-patterned restrictions around crystals, is their strength as it removes limitations on crystal sizes or environments. However, it is also their weakness when it comes to limiting undesired effects on yet-to-be-irradiated crystals due to diffusing heat, radicals or gas originating from previous exposures. We explored whether SOS chips can be used for damage-free serial data collection on the new ID29 beamline at the ESRF-EBS, a fourth-generation synchrotron light source, as well as at the new Cristallina-MX station at SwissFEL. We collected serial data sets from microcrystals of the hemoprotein DtpAa, which was reported to have a highly radiation-sensitive iron–water bond length. The data sets differ in step size between exposures within and between lines of a serpentine-like data-acquisition scan. We observe no significant changes in the distance of the water ligand of the heme in the structures obtained from the ID29 SSX data. However, when compared with those collected at Cristallina-MX, the diffraction intensities collected at ID29 suggest global damage akin to Bragg termination occurring during the 90 µs exposure at ID29. Moreover, differences in the heme geometry and the proximal histidine–iron bond length point to local damage in all ID29 data sets regardless of the X-ray spacing. SFX data collected at Cristallina-MX show a phase transition of the DtpAa crystal lattice for X-ray step sizes of ≤20 µm. This phase transition might be caused by heating and/or hydrogen-gas-induced crystal dehydration. Vigilance remains required to safeguard against radiation damage at fourth-generation synchrotrons and XFELs.
测试极限:使用无图案固定目标的连续晶体学。
在同步加速器和x射线自由电子激光器(XFELs)上使用串行晶体学方法进行环境温度数据采集时,片对片(SOS)固定目标芯片可以说是最通用、最便宜和最简单的样品传送方法。它们的定义特征是晶体周围没有任何硬图案的限制,这是它们的强度,因为它消除了晶体尺寸或环境的限制。然而,当涉及到限制由于先前暴露产生的漫射热量,自由基或气体而对尚未照射的晶体产生的不良影响时,这也是它们的弱点。我们探索了SOS芯片是否可以用于ESRF-EBS(第四代同步加速器光源)的新ID29光束线以及瑞士电子自由实验室的新cristallna - mx站的无损串行数据收集。我们从血蛋白DtpAa的微晶体中收集了一系列数据集,据报道,DtpAa具有高度辐射敏感的铁-水键长度。数据集在蛇形数据采集扫描线内和线之间的曝光之间的步长不同。我们观察到从ID29 SSX数据中获得的结构中血红素的水配体距离没有显着变化。然而,与在Cristallina-MX收集的衍射强度相比,在ID29收集的衍射强度表明,在ID29暴露90µs期间发生了类似布拉格终止的全局损伤。此外,血红素几何形状和近端组氨酸-铁键长度的差异表明,在所有ID29数据集中,无论x射线间隔如何,都存在局部损伤。在Cristallina-MX收集的SFX数据显示,当x射线步长≤20µm时,DtpAa晶格发生相变。这种相变可能是由加热和/或氢气引起的晶体脱水引起的。仍然需要保持警惕,以防止第四代同步加速器和xfel的辐射损害。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
IUCrJ
IUCrJ CHEMISTRY, MULTIDISCIPLINARYCRYSTALLOGRAPH-CRYSTALLOGRAPHY
CiteScore
7.50
自引率
5.10%
发文量
95
审稿时长
10 weeks
期刊介绍: IUCrJ is a new fully open-access peer-reviewed journal from the International Union of Crystallography (IUCr). The journal will publish high-profile articles on all aspects of the sciences and technologies supported by the IUCr via its commissions, including emerging fields where structural results underpin the science reported in the article. Our aim is to make IUCrJ the natural home for high-quality structural science results. Chemists, biologists, physicists and material scientists will be actively encouraged to report their structural studies in IUCrJ.
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