{"title":"Detection of introgresed loci from Pinus parviflora var. pentaphylla into P. pumila and their possible roles in adaptation to a warming climate","authors":"Yumeko Tarusawa , Takuro Ito , Yuji Isagi","doi":"10.1016/j.gecco.2025.e03886","DOIUrl":null,"url":null,"abstract":"<div><div>Interspecific introgression can contribute to a rapid adaptation of species in response to environmental shifts, particularly those driven by climate changes. We investigated genome-wide introgression patterns between <em>Pinus pumila,</em> which thrives in colder climates, and <em>Pinus parviflora</em> var. <em>pentaphylla</em>, which grows in relatively warmer environments. Using data from 65 individuals comprising 11,674 SNP loci, we conducted F<sub>ST</sub> and introgression pattern analysis, and identified <em>P. parviflora</em>-like genetic loci potentially introgressed into <em>Pinus pumila</em> and hybrids. Literature search reveal that these loci encode enzymes and proteins that are associated with plant growth, structural support, and responses to abiotic and biotic stresses. These findings suggest that <em>P. pumila</em> and hybrids may be enhancing its adaptive capacity to environmental changes through introgression from <em>P. parviflora</em> var. <em>pentaphylla</em>. This research provides novel insights into the adaptation strategies of alpine plants in the context of global warming, with potential implications for evolutionary and conservation biology.</div></div>","PeriodicalId":54264,"journal":{"name":"Global Ecology and Conservation","volume":"63 ","pages":"Article e03886"},"PeriodicalIF":3.4000,"publicationDate":"2025-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Global Ecology and Conservation","FirstCategoryId":"93","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2351989425004871","RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIODIVERSITY CONSERVATION","Score":null,"Total":0}
引用次数: 0
Abstract
Interspecific introgression can contribute to a rapid adaptation of species in response to environmental shifts, particularly those driven by climate changes. We investigated genome-wide introgression patterns between Pinus pumila, which thrives in colder climates, and Pinus parviflora var. pentaphylla, which grows in relatively warmer environments. Using data from 65 individuals comprising 11,674 SNP loci, we conducted FST and introgression pattern analysis, and identified P. parviflora-like genetic loci potentially introgressed into Pinus pumila and hybrids. Literature search reveal that these loci encode enzymes and proteins that are associated with plant growth, structural support, and responses to abiotic and biotic stresses. These findings suggest that P. pumila and hybrids may be enhancing its adaptive capacity to environmental changes through introgression from P. parviflora var. pentaphylla. This research provides novel insights into the adaptation strategies of alpine plants in the context of global warming, with potential implications for evolutionary and conservation biology.
种间渗透有助于物种快速适应环境变化,特别是气候变化驱动的环境变化。我们研究了生长在较冷气候下的矮松(Pinus pumila)和生长在相对温暖环境下的parviflora var. pentaphylla之间的全基因组渗入模式。利用65个个体11,674个SNP位点的数据,进行FST分析和基因渗入模式分析,鉴定出了可能渗入矮松及其杂交品种的parviflora样遗传位点。文献检索表明,这些基因座编码的酶和蛋白质与植物生长、结构支持以及对非生物和生物胁迫的反应有关。这些结果表明,矮枝假单胞菌及其杂交种可能是通过从细小假单胞菌变种的渗入来增强其对环境变化的适应能力。该研究为全球变暖背景下高山植物的适应策略提供了新的见解,对进化和保护生物学具有潜在的意义。
期刊介绍:
Global Ecology and Conservation is a peer-reviewed, open-access journal covering all sub-disciplines of ecological and conservation science: from theory to practice, from molecules to ecosystems, from regional to global. The fields covered include: organismal, population, community, and ecosystem ecology; physiological, evolutionary, and behavioral ecology; and conservation science.