Hypergraph aggregation contrastive learning network for lung cancer prognostic prediction based on tumor microenvironment

IF 4.9 2区 医学 Q1 ENGINEERING, BIOMEDICAL
Xu Lu , Xiaojing Huang , Chenshuo Tang , Yuan Yuan , Haoxin Peng , Miao He , Wenhua Liang , Shaopeng Liu
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Abstract

Lung cancer remains a leading cause of cancer-related deaths globally, with non-small cell lung cancer (NSCLC) accounting for approximately 85% of cases. The tumor microenvironment (TME) plays a crucial role in lung cancer progression and treatment response. Multiplex immunofluorescence (MIF) technology provides a unique perspective for analyzing spatial relationships within the complex TME. However, existing methods for processing MIF pathological images often process each image in isolation, overlooking both intra-patient multi-image complementarity and inter-patient pathological similarities. To address these limitations, we introduce the Hypergraph Aggregation Contrastive Learning Network (HACLN), which constructs a hypergraph to jointly model intra-patient multi-image features and inter-patient pathological relationships. HACLN aggregates features from multiple MIF images per patient, decomposes them into specialized subgraphs, and integrates them to enhance feature discrimination. We validate HACLN using an immunofluorescence image dataset from the First Affiliated Hospital of Guangzhou Medical University, demonstrating its effectiveness in capturing microenvironmental features and modeling patient-to-patient similarities. Here, we show that HACLN achieves a C-index of 0.7023, outperforming existing methods, providing a new direction for future research in lung cancer prognostic prediction based on the tumor microenvironment. Code is available at: https://github.com/sujuKyukyu/HACLN_code
基于肿瘤微环境的超图聚集对比学习网络肺癌预后预测
肺癌仍然是全球癌症相关死亡的主要原因,非小细胞肺癌(NSCLC)约占85%。肿瘤微环境(tumor microenvironment, TME)在肺癌的进展和治疗反应中起着至关重要的作用。多重免疫荧光(MIF)技术为分析复杂TME内的空间关系提供了独特的视角。然而,现有的MIF病理图像处理方法往往是孤立地处理每个图像,忽略了患者内部多图像的互补性和患者之间的病理相似性。为了解决这些限制,我们引入了超图聚合对比学习网络(HACLN),该网络构建了一个超图来联合建模患者内部多图像特征和患者之间的病理关系。HACLN从每个患者的多个MIF图像中聚集特征,将其分解为专门的子图,并将其整合以增强特征识别。我们使用广州医科大学第一附属医院的免疫荧光图像数据集验证了HACLN,证明了其在捕获微环境特征和建模患者间相似性方面的有效性。本研究表明,HACLN的c指数达到0.7023,优于现有方法,为未来基于肿瘤微环境的肺癌预后预测研究提供了新的方向。代码可从https://github.com/sujuKyukyu/HACLN_code获得
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来源期刊
Biomedical Signal Processing and Control
Biomedical Signal Processing and Control 工程技术-工程:生物医学
CiteScore
9.80
自引率
13.70%
发文量
822
审稿时长
4 months
期刊介绍: Biomedical Signal Processing and Control aims to provide a cross-disciplinary international forum for the interchange of information on research in the measurement and analysis of signals and images in clinical medicine and the biological sciences. Emphasis is placed on contributions dealing with the practical, applications-led research on the use of methods and devices in clinical diagnosis, patient monitoring and management. Biomedical Signal Processing and Control reflects the main areas in which these methods are being used and developed at the interface of both engineering and clinical science. The scope of the journal is defined to include relevant review papers, technical notes, short communications and letters. Tutorial papers and special issues will also be published.
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