BestopCloud: an integrated one-stop solution for single-cell RNA sequencing data analysis.

IF 3.7 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Rufei Pan, Chao Li, Feifei Shi, Panfei Wang, Jing Liu, Tiantian Wang, Cai Lian, Wenling Zheng, Haixia Wei, Keqing Song, Jie Liu
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引用次数: 0

Abstract

Single-cell RNA sequencing (scRNA-seq) technology has emerged as a powerful tool for unveiling cellular heterogeneity, yet the high dimensionality and complexity of the data it generates pose analytical challenges for non-professional programmers. To streamline the process, we have developed BestopCloud, a functionally comprehensive and user-friendly online analysis platform. Comprising nine modules, BestopCloud supports diverse parameter settings within each module and is capable of producing high-quality chart files. Furthermore, these modules can be used independently and flexibly linked through data flow. In summary, BestopCloud provides researchers with an in-depth solution for scRNA-seq data processing, analysis, and visualization.

BestopCloud:单细胞RNA测序数据分析综合一站式解决方案。
单细胞RNA测序(scRNA-seq)技术已成为揭示细胞异质性的强大工具,但其产生的数据的高维数和复杂性对非专业程序员提出了分析挑战。为了简化流程,我们开发了BestopCloud,这是一个功能全面且用户友好的在线分析平台。BestopCloud包括9个模块,每个模块支持不同的参数设置,能够生成高质量的图表文件。此外,这些模块可以独立使用,并通过数据流灵活链接。综上所述,BestopCloud为研究人员提供了scRNA-seq数据处理、分析和可视化的深入解决方案。
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来源期刊
BMC Genomics
BMC Genomics 生物-生物工程与应用微生物
CiteScore
7.40
自引率
4.50%
发文量
769
审稿时长
6.4 months
期刊介绍: BMC Genomics is an open access, peer-reviewed journal that considers articles on all aspects of genome-scale analysis, functional genomics, and proteomics. BMC Genomics is part of the BMC series which publishes subject-specific journals focused on the needs of individual research communities across all areas of biology and medicine. We offer an efficient, fair and friendly peer review service, and are committed to publishing all sound science, provided that there is some advance in knowledge presented by the work.
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