Fluorescent Triazolyl unnatural amino acids in protein engineering: Encoding super folder green fluorescent protein and spectroscopic study.

IF 4.7 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Subhendu Sekhar Bag, Aniket Banerjee, Sinchini Barman, Sankalp Tiwari
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引用次数: 0

Abstract

CuAAC-derived fluorescent unnatural amino acids (FTUAAs) have been highly advantageous owing to their enhanced stability, increased resistance to proteolysis, better biocompatibility, and modulated photophysics. However, such a unique class of amino acids has never been previously incorporated into desired protein sequences using the genetic code expansion (GCE) approach. Herein, we have reported our pioneering efforts towards the site-specific incorporation of several novel FTUAAs into the 150th codon position of Super Folder Green Fluorescent Protein (sfGFP), followed by their expression in E. coli cells and the study of their photophysics. A Methanosarcina mazei-derived pyrrolysyl-tRNA synthetase, namely Tet 3.0 aaRS, and its corresponding tRNA pair have been utilised in these studies. The results have indicated the efficient incorporation of all the unnatural amino acids in different experimental settings. Studies of photophysical properties, MALDI TOF mass analysis, fluorescence microscopy, and molecular docking have validated our claims. In fact, the incorporation of FTUAAs into reporter sfGFP using the GCE technique has potentially opened up a gateway for incorporating amino acids containing an integral triazole moiety into any protein sequence to expand their functionalities. Incorporating FTUAAs can also help intrinsically label proteins to understand their roles in various molecular pathways, among other applications.

荧光三唑基非天然氨基酸在蛋白质工程中的应用:超级文件夹绿色荧光蛋白的编码和光谱研究。
cuaac衍生的荧光非天然氨基酸(FTUAAs)由于其增强的稳定性、增强的抗蛋白水解能力、更好的生物相容性和可调节的光物理特性而具有很高的优势。然而,这种独特的氨基酸类别以前从未使用遗传密码扩展(GCE)方法纳入所需的蛋白质序列。在此,我们报道了我们在超级文件夹绿色荧光蛋白(sfGFP)的第150个密码子位置特异性结合几个新的FTUAAs的开创性工作,随后在大肠杆菌细胞中表达并研究了它们的光物理特性。在这些研究中使用了一种Methanosarcina mazeii衍生的pyrolyyl -tRNA合成酶,即Tet 3.0 aaRS及其对应的tRNA对。结果表明,在不同的实验环境下,所有非天然氨基酸的有效掺入。光物理性质、MALDI TOF质量分析、荧光显微镜和分子对接的研究证实了我们的说法。事实上,使用GCE技术将FTUAAs整合到报告基因sfGFP中,可能为将含有完整三唑片段的氨基酸整合到任何蛋白质序列中以扩展其功能打开了大门。结合FTUAAs还可以帮助内在标记蛋白质,以了解它们在各种分子途径中的作用,以及其他应用。
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来源期刊
Bioorganic Chemistry
Bioorganic Chemistry 生物-生化与分子生物学
CiteScore
9.70
自引率
3.90%
发文量
679
审稿时长
31 days
期刊介绍: Bioorganic Chemistry publishes research that addresses biological questions at the molecular level, using organic chemistry and principles of physical organic chemistry. The scope of the journal covers a range of topics at the organic chemistry-biology interface, including: enzyme catalysis, biotransformation and enzyme inhibition; nucleic acids chemistry; medicinal chemistry; natural product chemistry, natural product synthesis and natural product biosynthesis; antimicrobial agents; lipid and peptide chemistry; biophysical chemistry; biological probes; bio-orthogonal chemistry and biomimetic chemistry. For manuscripts dealing with synthetic bioactive compounds, the Journal requires that the molecular target of the compounds described must be known, and must be demonstrated experimentally in the manuscript. For studies involving natural products, if the molecular target is unknown, some data beyond simple cell-based toxicity studies to provide insight into the mechanism of action is required. Studies supported by molecular docking are welcome, but must be supported by experimental data. The Journal does not consider manuscripts that are purely theoretical or computational in nature. The Journal publishes regular articles, short communications and reviews. Reviews are normally invited by Editors or Editorial Board members. Authors of unsolicited reviews should first contact an Editor or Editorial Board member to determine whether the proposed article is within the scope of the Journal.
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