Deciphering D-2,3-Butanediol Metabolic Pathways in a Newly Isolated Bacillus velezensis and Rationally Engineering Bacillus subtilis for Efficient Production of Optically Pure D-2,3-Butanediol.

IF 3.9 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Na Guo, Shangjun Wang, Christopher Tyler Whitfield, William D Batchelor, Yifen Wang, David Blersch, Brendan T Higgins, Yucheng Feng, Mark R Liles, Luz E de-Bashan, Wei Luo, Liang Guo, Yi Wang, Yuechao Ma
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Abstract

2,3-Butanediol (2,3-BD) is a versatile platform chemical with diverse applications spanning polymers, solvents, and fuel additives. Developing biobased processes for producing this compound with high enantioselectivity and minimal waste generation is crucial for advancing sustainable biomanufacturing from renewable resources. In this work, an environmentally friendly strategy is reported to produce optically pure D-2,3-BD by harnessing and engineering Bacillus strains under mild fermentation conditions. First, an isolate of Bacillus velezensis FJ-4, observed to generate high titers of D-2,3-BD, underwent genome sequencing, and the biosynthetic pathway of D-2,3BD was elucidated. Genes associated with D-2,3-BD synthesis were subsequently introduced into genetically tractable Bacillus subtilis 168 to create an efficient host for D-2,3-BD production. Rational metabolic engineering approaches, including deletion of byproduct pathways (ldh and pta), manipulation of redox balance via nadC knockout, and overexpression of core biosynthetic genes (bdhA and alsSD), led to a near-theoretical yield (92%) and a titer of 34.1 g/L D-2,3-BD. Further tuning of NADH regeneration by integrating fdh and supplementing formate improved D-2,3-BD volumetric productivity by 10%. Overall, this work elucidates the biochemistry of D-2,3-BD biosynthesis in Bacillus species and demonstrates an effective route toward sustainable production of D-2,3-BD from bioresources. The strategies developed herein provide a blueprint for environmentally responsible biomanufacturing of value-added chemicals, supporting the transition toward a circular and sustainable chemical industry.

新分离芽孢杆菌中d -2,3-丁二醇代谢途径的解析和合理工程枯草芽孢杆菌高效生产光纯d -2,3-丁二醇
2,3-丁二醇(2,3- bd)是一种多功能平台化学品,具有多种应用,包括聚合物,溶剂和燃料添加剂。开发生物基工艺来生产这种对映体选择性高、废物产生最少的化合物,对于推进利用可再生资源的可持续生物制造至关重要。在这项工作中,报告了一种环境友好的策略,利用和工程芽孢杆菌菌株在温和的发酵条件下生产光学纯净的d -2,3- bd。首先,对一株能产生高滴度d -2,3- bd的velezensis芽孢杆菌FJ-4进行了基因组测序,并阐明了d -2,3- bd的生物合成途径。随后,将合成d -2,3- bd的相关基因导入遗传易处理的枯草芽孢杆菌168中,为d -2,3- bd的生产创造了高效的宿主。合理的代谢工程方法,包括删除副产物途径(ldh和pta),通过敲除nadC来操纵氧化还原平衡,以及核心生物合成基因(bdhA和alsSD)的过表达,导致接近理论的产量(92%)和滴度为34.1 g/L d -2,3- bd。通过整合fdh和补充甲酸进一步调整NADH再生,将d -2,3- bd的体积生产率提高了10%。总之,本研究阐明了芽孢杆菌合成d -2,3- bd的生物化学过程,并为从生物资源中可持续生产d -2,3- bd提供了一条有效途径。本文制定的战略为增值化学品的环境负责任的生物制造提供了蓝图,支持向循环和可持续的化学工业过渡。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
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