Disha Sushant Wankhede, Aniket K. Shahade, Priyanka V. Deshmukh, Akshay Manikjade, Makrand Shahade, Pritam H. Gohatre, Kanchan Tidke
{"title":"Deep Neural Network-Based Risk Prediction of Glioblastoma Multiforme Recurrence","authors":"Disha Sushant Wankhede, Aniket K. Shahade, Priyanka V. Deshmukh, Akshay Manikjade, Makrand Shahade, Pritam H. Gohatre, Kanchan Tidke","doi":"10.1007/s12031-025-02412-w","DOIUrl":null,"url":null,"abstract":"<div><p>This study aims to develop and evaluate deep neural network (DNN) models for accurately predicting the recurrence risk of glioblastoma multiforme (GBM) to enhance individualized treatment strategies and improve patient outcomes. This study implemented DNN architectures optimized using a hybrid differential evolution neural network (HDE-NN) framework to forecast GBM recurrence risk, particularly in patients at advanced disease stages. The models were trained and validated on a multimodal dataset comprising genomic profiles, imaging-derived metrics, and longitudinal clinical records from 780 GBM patients. Data were sourced from The Cancer Genome Atlas (TCGA) and institutional repositories. Performance was benchmarked against conventional machine learning models, including support vector machines (SVM), random forests (RF), and standard DNNs. The models were implemented in Python. The proposed HDE-optimized DNN achieved an accuracy of 94%, precision of 92%, recall of 90%, F1 score of 91%, and an AUC-ROC of 0.96. These metrics significantly outperformed baseline models, with improvements of 6–12% across evaluation criteria. Confidence intervals (95%) were computed via tenfold cross-validation, confirming statistical robustness. This research introduces a high-performance and generalizable deep learning framework for GBM recurrence prediction. By incorporating multi-source clinical and genomic data, the model demonstrates superior predictive capacity over traditional methods. These findings support the integration of AI-driven tools into GBM care workflows to improve prognosis assessment and personalize therapeutic interventions.</p></div>","PeriodicalId":652,"journal":{"name":"Journal of Molecular Neuroscience","volume":"75 4","pages":""},"PeriodicalIF":2.7000,"publicationDate":"2025-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Molecular Neuroscience","FirstCategoryId":"3","ListUrlMain":"https://link.springer.com/article/10.1007/s12031-025-02412-w","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
This study aims to develop and evaluate deep neural network (DNN) models for accurately predicting the recurrence risk of glioblastoma multiforme (GBM) to enhance individualized treatment strategies and improve patient outcomes. This study implemented DNN architectures optimized using a hybrid differential evolution neural network (HDE-NN) framework to forecast GBM recurrence risk, particularly in patients at advanced disease stages. The models were trained and validated on a multimodal dataset comprising genomic profiles, imaging-derived metrics, and longitudinal clinical records from 780 GBM patients. Data were sourced from The Cancer Genome Atlas (TCGA) and institutional repositories. Performance was benchmarked against conventional machine learning models, including support vector machines (SVM), random forests (RF), and standard DNNs. The models were implemented in Python. The proposed HDE-optimized DNN achieved an accuracy of 94%, precision of 92%, recall of 90%, F1 score of 91%, and an AUC-ROC of 0.96. These metrics significantly outperformed baseline models, with improvements of 6–12% across evaluation criteria. Confidence intervals (95%) were computed via tenfold cross-validation, confirming statistical robustness. This research introduces a high-performance and generalizable deep learning framework for GBM recurrence prediction. By incorporating multi-source clinical and genomic data, the model demonstrates superior predictive capacity over traditional methods. These findings support the integration of AI-driven tools into GBM care workflows to improve prognosis assessment and personalize therapeutic interventions.
期刊介绍:
The Journal of Molecular Neuroscience is committed to the rapid publication of original findings that increase our understanding of the molecular structure, function, and development of the nervous system. The criteria for acceptance of manuscripts will be scientific excellence, originality, and relevance to the field of molecular neuroscience. Manuscripts with clinical relevance are especially encouraged since the journal seeks to provide a means for accelerating the progression of basic research findings toward clinical utilization. All experiments described in the Journal of Molecular Neuroscience that involve the use of animal or human subjects must have been approved by the appropriate institutional review committee and conform to accepted ethical standards.