Role of Hydration in Excited-State Proton Transfer in Adenine-Thymine Nucleobase Pairs.

IF 2.9 2区 化学 Q3 CHEMISTRY, PHYSICAL
Moumita Banerjee, Nilanjan Mitra
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引用次数: 0

Abstract

This study investigates the excited-state proton transfer (ESPT) mechanism in canonical adenine-thymine (A-T) nucleobase pairs under gas-phase and explicitly hydrated conditions. Using a combination of time-dependent density functional theory (TDDFT), static potential energy surface (PES) analyses, and nonadiabatic surface hopping dynamics, we reveal that hydration induces a mechanistic switch from charge-transfer-driven ESPT in the gas phase to solvent-assisted proton relay in aqueous environments. Explicit hydration environment modulates both the energetic landscape and the nature of electronic transitions, reducing charge-transfer character and stabilizing proton-transferred intermediates. Difference density plots and UV-vis spectra highlight excited-state antiaromaticity as a potential driving force for ESPT, which is further supported by computed aromaticity indices. Dynamical simulations demonstrate that excitation to higher singlet states (S2) enhances access to proton transfer channels, particularly in hydrated systems. Overall, our results offer a unified mechanistic framework for understanding how hydration, excited-state reactivity, and photophysical stability are intricately linked in DNA base pairs, advancing insight into photoprotection and mutation pathways under biologically relevant conditions.

水合作用在腺嘌呤-胸腺嘧啶核碱基对激发态质子转移中的作用。
本研究探讨了典型腺嘌呤-胸腺嘧啶(A-T)核碱基对在气相和明确水合条件下的激发态质子转移(ESPT)机制。结合时间依赖密度泛函数理论(TDDFT)、静态势能面(PES)分析和非绝热表面跳跃动力学,我们揭示了水合作用诱导了一种机制转换,从气相中电荷转移驱动的ESPT到水环境中溶剂辅助的质子继电器。明确的水合环境调节了能量景观和电子跃迁的性质,降低了电荷转移特征并稳定了质子转移的中间体。密度差图和紫外可见光谱显示激发态抗芳香性是ESPT的潜在驱动力,计算的芳香性指数进一步支持了这一观点。动力学模拟表明,激发到更高的单重态(S2)可以增强质子转移通道,特别是在水合体系中。总的来说,我们的研究结果为理解水合作用、激发态反应性和光物理稳定性如何在DNA碱基对中错综复杂地联系在一起提供了一个统一的机制框架,促进了对生物相关条件下光保护和突变途径的深入了解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
5.80
自引率
9.10%
发文量
965
审稿时长
1.6 months
期刊介绍: An essential criterion for acceptance of research articles in the journal is that they provide new physical insight. Please refer to the New Physical Insights virtual issue on what constitutes new physical insight. Manuscripts that are essentially reporting data or applications of data are, in general, not suitable for publication in JPC B.
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