Pan-cancer analysis reveals HMOX1 as a cancer prognosis and immune infiltration-related biomarker.

IF 3.6 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Yingli Men, Hui Wang, Xiaoyan Xu, Miling Yang, Ruiting Feng, Jizhi Zhao, Ying Liu, Lu Yang, Yinsen Song, Cong Ding
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引用次数: 0

Abstract

HMOX1 has gained increasing recognition across multiple malignancies; however, its precise oncogenic or tumor-suppressive roles remain incompletely defined. In this study, we comprehensively investigated HMOX1 across diverse tumor types utilizing the cancer genome atlas (TCGA). We further integrated data from multiple bioinformatics platforms, including TIMER2, UALCAN, GEPIA2, cBioPortal, R, GSCA, and LinkedOmics. Western blotting and quantitative real-time PCR (qRT-PCR) confirmed differential HMOX1 expression between normal renal epithelial cells and KIRC cells. Functional assays in vitro and in vivo demonstrated that HMOX1 regulates proliferation, migration, and cell-cycle progression in 786-O and Caki-1 cells. Pan-cancer analyses revealed that HMOX1 is aberrantly expressed across multiple malignancies with significant associations with the tumor stage. Survival analyses indicated that elevated HMOX1 expression predicted poor overall survival (OS) in LGG (P = 0.025) but favorable OS and disease-free survival (DFS) in KIRC (OS: P = 0.00062; DFS: P = 9 × 10-4). Moreover, mutations were the predominant genetic alteration affecting HMOX1, while promoter methylation was broadly reduced across cancers. HMOX1 expression positively correlated with immune infiltration by CD8+ T cells (KIRC: Spearman ρ = 0.26, FDR = 2.56 × 10-8) and macrophages (KIRC: Spearman ρ = 0.32, FDR = 2.77 × 10-13). Gene Ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses in KIRC implicated HMOX1 in the chemokine and NF-κB signaling pathways. Both in vitro and in vivo experiments demonstrated that HMOX1 knockdown accelerates cell-cycle progression and enhances proliferation and migration in 786-O and Caki-1 cells. Collectively, our findings establish HMOX1 as a promising prognostic biomarker and potential immunotherapeutic target across multiple cancers.

泛癌分析显示HMOX1是癌症预后和免疫浸润相关的生物标志物。
HMOX1在多种恶性肿瘤中得到越来越多的认识;然而,其确切的致癌或肿瘤抑制作用仍不完全确定。在这项研究中,我们利用癌症基因组图谱(TCGA)全面研究了不同肿瘤类型的HMOX1。我们进一步整合了来自多个生物信息学平台的数据,包括TIMER2、UALCAN、GEPIA2、cbiopportal、R、GSCA和LinkedOmics。Western blotting和quantitative real-time PCR (qRT-PCR)证实HMOX1在正常肾上皮细胞和KIRC细胞中的表达存在差异。体外和体内功能实验表明,HMOX1调节786-O和Caki-1细胞的增殖、迁移和细胞周期进程。泛癌分析显示,HMOX1在多种恶性肿瘤中异常表达,并与肿瘤分期显著相关。生存分析表明,HMOX1表达升高预示LGG患者总生存期(OS)较差(P = 0.025),而KIRC患者总生存期和无病生存期(DFS)较好(OS: P = 0.00062; DFS: P = 9 × 10-4)。此外,突变是影响HMOX1的主要遗传改变,而启动子甲基化在癌症中普遍降低。HMOX1的表达与CD8+ T细胞(KIRC: Spearman ρ = 0.26, FDR = 2.56 × 10-8)和巨噬细胞(KIRC: Spearman ρ = 0.32, FDR = 2.77 × 10-13)的免疫浸润呈正相关。KIRC的基因本体和京都基因与基因组百科全书(KEGG)富集分析表明HMOX1参与趋化因子和NF-κB信号通路。体外和体内实验均表明,HMOX1敲低可加速786-O和Caki-1细胞的细胞周期进程,增强细胞增殖和迁移。总之,我们的研究结果确定HMOX1是一种有希望的预后生物标志物和多种癌症的潜在免疫治疗靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
5.80
自引率
2.40%
发文量
129
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