Evaluation of an automated antimicrobial susceptibility testing system performance for colistin susceptibility in carbapenem-resistant Acinetobacter baumannii isolates.

IF 3.8 2区 生物学 Q2 MICROBIOLOGY
Arzu İlki, Fatih Mehmet Akıllı, Sevim Alpsoy Özsoy, Zeynep Saygı, İsmail Yüceel-Timur
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引用次数: 0

Abstract

This study aims to assess the efficacy of VITEK 2 AST-XN21 (bioMérieux, Marcy l'Étoile, France) cards in identifying colistin susceptibility, comparing their performance with broth microdilution (BMD) results. A total of 187 carbapenem-resistant Acinetobacter baumannii were included and identified by MALDI-TOF (VITEK MS, bioMérieux, Marcy l'Étoile, France), and colistin susceptibility was determined by BMD and the VITEK 2 AST-XN21 card. The cs02n version is used in the VITEK 2. Isolates were evaluated for essential (EA) and categorical (CA) agreements, error rates, and ISO 20776-2:2021 bias rate (acceptable if bias rate is between -30% ≤ bias ≤+30%). Minimum inhibitory concentration (MIC) was interpreted according to the European Committee on Antimicrobial Susceptibility Testing breakpoints (susceptible ≤2 µg/mL; resistant >2 µg/mL). All isolates were subjected to in-house multiplex PCR for possible resistance genes mcr-1, mcr-2, mcr-3, mcr-4, and mcr-5. Out of 187 isolates, 16.04% (n = 30) of all isolates were determined as colistin resistant by the BMD method. MIC50 and MIC90 of the isolates were detected as 1 and 4 mg/L, respectively. When VITEK 2 AST-XN21 results were compared with BMD, CA and EA were 94.6% (177/187) and 89.1% (156/175), respectively. Very major error (3.2%, 6/187) and major error (2.1%, 4/187) were detected. ISO 20776-2:2021 bias rate was 3.6%. No mcr1-5 genes were detected.

Importance: Colistin resistance in carbapenem-resistant Acinetobacter baumannii (CR-Ab) remains a global problem, and broth microdilution constitutes the workload of routine clinical microbiology laboratories. This study is the first to evaluate the cs02n version in the VITEK 2. Our results suggest that VITEK 2 AST-XN21 cards could be an alternative method to detect colistin resistance in CR-Ab isolates.

耐碳青霉烯鲍曼不动杆菌分离株粘菌素敏感性的自动药敏试验系统性能评价。
本研究旨在评估VITEK 2 AST-XN21 (biomacrieux, Marcy l'Étoile, France)卡在鉴定粘菌素敏感性方面的有效性,并将其与肉汤微量稀释(BMD)结果进行比较。共纳入187株耐碳青霉烯鲍曼不动杆菌,采用MALDI-TOF (VITEK MS, biomrieux, Marcy l'Étoile, France)鉴定,采用BMD和VITEK 2 AST-XN21卡测定粘菌素敏感性。在VITEK 2中使用cs02n版本。对分离物进行基本(EA)和分类(CA)一致性、错误率和ISO 20776-2:2021偏倚率(如果偏倚率在-30%≤偏倚≤+30%之间,则可接受)的评估。最低抑菌浓度(MIC)根据欧洲抗微生物药物敏感性试验委员会的断点(敏感≤2µg/mL;耐药≤2µg/mL)进行解释。所有分离株均采用内部多重PCR检测可能的耐药基因mcr-1、mcr-2、mcr-3、mcr-4和mcr-5。在187株分离株中,BMD法鉴定为耐粘菌素的占16.04% (n = 30)。MIC50和MIC90分别为1和4 mg/L。当VITEK 2 AST-XN21结果比较BMD时,CA和EA分别为94.6%(177/187)和89.1%(156/175)。检测到非常严重误差(3.2%,6/187)和严重误差(2.1%,4/187)。ISO 20776- 2:21 21偏置率为3.6%。未检测到mcr1-5基因。重要性:耐碳青霉烯鲍曼不动杆菌(CR-Ab)的粘菌素耐药性仍然是一个全球性问题,肉汤微量稀释构成了常规临床微生物实验室的工作量。本研究首次在VITEK 2中评估cs02n版本。我们的结果表明,VITEK 2 AST-XN21卡可作为检测CR-Ab分离株粘菌素耐药性的替代方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Microbiology spectrum
Microbiology spectrum Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
3.20
自引率
5.40%
发文量
1800
期刊介绍: Microbiology Spectrum publishes commissioned review articles on topics in microbiology representing ten content areas: Archaea; Food Microbiology; Bacterial Genetics, Cell Biology, and Physiology; Clinical Microbiology; Environmental Microbiology and Ecology; Eukaryotic Microbes; Genomics, Computational, and Synthetic Microbiology; Immunology; Pathogenesis; and Virology. Reviews are interrelated, with each review linking to other related content. A large board of Microbiology Spectrum editors aids in the development of topics for potential reviews and in the identification of an editor, or editors, who shepherd each collection.
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